Discover, Analyze, and Integrate NIH Common Fund Data

The NIH Common Fund programs generate diverse datasets from a variety of projects ranging from genomics to phenotypes. The Common Fund Data Ecosystem (CFDE) aims to facilitate improved discovery, reuse, integration, and analyses of these datasets to form novel hypothesis for accelerating discoveries in biomedical research.

The Common Fund Data Ecosystem (CFDE) aims to enable broad use of data generated by Common Fund Programs to accelerate hypothesis generation and discovery.

TRAINING & OUTREACH
GlyGen-CFDE Summer Internship Program

The GlyGen-CFDE project is seeking applications for a paid 8-week summer research in-person internship in 2024 for undergraduate and graduate students in Washington DC at George Washington University. This 8-week internship program is tailored to provide hands-on experience in bioinformatics and biology applications in biomedical research through Common Fund Data Ecosystem (CFDE) and GlyGen tools and data.

Starts: June 3, 2024

Common Fund programs partnered with the CFDE

The NIH Common Fund is a funding entity within the NIH that supports bold scientific programs that catalyze discovery across all biomedical and behavioral research.

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Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal

Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal
fair

Making data more FAIR

The Data Resource and Knowledge Centers are dedicated to enhancing the accessibility and utility of Common Fund-generated data and resources, striving to uphold the FAIR principles. This commitment serves as a catalyst for groundbreaking biomedical discoveries, fostering synergies across the diverse datasets within the Common Fund ecosystem, thereby unlocking novel avenues of research and innovation.
  • Findable
  • Accessible
  • Interoperable
  • Reusable

Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

Check out the #KidsFirstDRC portal, a vast pediatric data resource for cancer and congenital disorders with over 100k records. It's linked with #CAVATICA for cloud-based analysis and sharing. Learn more in our FAQ: buff.ly/45qY9dR #PediatricHealth #DataScience #KidsFirst
4
Replying to @_hubmap
Blue = nuclei cyan = immune cells red = smooth muscle cells yellow = endothelial cells magenta = epithelial cells green = goblet cells
1
Once again, it’s time to test your intestinal fortitude with a gut-busting #CODEX image of the inner workings of your #intestines from #_hubmap researcher @johnhickey22. After some masticating & ruminating, you’re sure to get through to the bottom! @Stanford @GarryPNolan @DukeU
5
#NIHHighRisk is holding a pre-application webinar for the NIH Director's Pioneer Award on June 25, 2024, from 12:00-1:30 PM ET. See the funding announcement for more details: grants.nih.gov/grants/guide/r…
3
Learn more about how #ServiceDogs (#WorkingDogs) may help #veterans and #military service members manage symptoms of #PTSD. #PTSDAwarenessMonth
0
Ready to master the world of big data analysis? Join the Kids First CFDE Pediatric PowerUp this summer for an action-packed ramp-up into powerful cloud-based platforms! Register here: buff.ly/3VE1d32 #KidsFirst #CFDE #DataScience #KidsFirstCFDEPowerUp
1
Tune into @NIH #BuildUPTrust Challenge Demo Day, tomorrow, June 12th, for demonstrations and informational sessions from #CEAL and Common Fund’s #ComPASS, and announcements of the #BuildUPTrust finalists and honorable mentions at the end of the webinar! us02web.zoom.us/webinar/regist…
1
Interested in conducting #CommunityEngaged Research? Attend the Grant Writing for Success Webinar by the Community Engagement Alliance Consultative Resource #CEACR & Community Partnerships to Advance Science for Society #ComPASS on 6/12 at 1 PM ET us06web.zoom.us/webinar/regist…
2
Please join us this Thursday (06/13/24) at 1 p.m. ET for UDN Grand Rounds hosted by the Harvard Teaching Hospitals. View the full schedule and register harvard.zoom.us/webinar/regist…………… #FreeCME #GrandRounds
4
The #NIHHighRisk Early Independence Award is hosting a pre-application webinar on June 26 at 1 PM EDT. Register now to learn about this opportunity to kick-start an independent research career. More detail: grants.nih.gov/grants/guide/r…
3
Tune in next week for the #Bridge2AI AI READI monthly webinar! Hear Dr. Abramoff discuss the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom on 6/18 at 3PM ET: bit.ly/4arolWV.
0
Registration is now open for the Nuclear Architecture Meeting hosted by #4DNucleome, which will be held in San Diego, CA on Dec 11-13, 2024. This meeting is open to the public. Register and submit an abstract today: bit.ly/3X9gha0
8
Participant 224: Male, age 5 with a heart defect, brain abnormalities, and global developmental delay, partially caused by changes in the #RBM28 gene. Reach out if you know of others with similar symptoms and variants! undiagnosed.hms.harvard.edu/participants/p…
1
Project Pitch is closing Monday, June 17 for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Use SPARC tools and data in creative ways. bit.ly/436EHlt #data #openscience #code
3
I see glycans everywhere.
12
H3Africa/@DSI_Africa Coordinating Centre PI @MichelleSkelt18 attends the Egyptian Genome Symposium at the Africa Health Excon. #DSIAfrica #H3Africa #NIH
2
H3Africa members attend the 2nd Undiagnosed Hackathon in Nijmegen, The Netherlands. #H3Africa #NIH
0
Did you hear the news today about the launch of the CARE for Health™ initiative? Join us tomorrow 10am-12:30pm ET as @NIHDirector Dr. Monica Bertagnolli talks more about #NIH activities to expand access to #ClinicalResearch through #PrimaryCare. Register: bit.ly/3R8DIwD
2
Interested in #opportunities in #ClinicalResearch and #HealthEquity? Dr. Monica Bertagnolli, @NIHDirector, discusses in an editorial in @ScienceMagazine a new initiative called CARE for Health™ that's meant to connect the lab, clinic, and community. science.org/doi/10.1126/sc…
21
Today, the @NIH announced a new Common Fund program to address #ClinicalResearch #equity. Read about Communities Advancing Research Equity for Health™ (CARE for Health™) in the official press release. #CAREforHealth
0
The GlyGen-CFDE summer internship has started this week. Five students will be learning about and working on Glycosciences&CFDE projects for the next 8 weeks. @CfdeNih
5
#NIHHighRisk is holding a Transformative Research Award pre-application webinar on June 26, 2024, from 3:30-5:00 PM EDT. Registration link and more detail can be found in the funding announcement: grants.nih.gov/grants/guide/r…
7
This virtual series reviews updates in the OpenNerve Platform, an open-source implantable device that stimulates & records the peripheral nervous system, with a focus on the vagus and sacral nerves. Watch the webinar on-demand now. youtu.be/9QbOBOO5BNE?fe… #NIH_SPARC #opendata
2
Idea submissions and team lead signups close this weekend on June 8 for the #NIH_SPARC #FAIRData codeathon! Submit your ideas on #DataVisualization, #ComputationalModels, and other analysis tools today. bit.ly/436EHlt
2
SPARC is an open repository for peripheral nervous system and systems physiology data, models, and devices. For a limited time, SPARC is waiving fees for curation and publication of data contributions that fit our mission. Read more: bit.ly/3wQNhJB #NIH_SPARC #OpenData
2
Register today for the #NIHHighRisk program’s New Innovator Award pre-application webinar on June 25 from 2-3:30 PM ET to learn about the award and the innovative, high-impact projects it supports. Learn more: grants.nih.gov/grants/guide/r…
4
Would you like to learn how to obtain IMPC data by constructing simple Apache Solr API queries? If you're interested and you missed the IMPC Data API Workshop, the recording is now live on our YouTube Channel - IMPC Outreach! More: mousephenotype.org/blog/2024/04/1… #IMPC #Data #API #Solr
1
Thanks so much @ksluka0101 for crossing the Atlantic and sharing your research of biomarkers and predictors of the transition to #chronicpain. #BPSASM2024
24
Interested in pursuing high-risk, pioneering research? Save the date for June 25, 2024, from 12:00-1:30 PM ET for the #NIHHighRisk Pioneer Award pre-application webinar. See the announcement for more details: grants.nih.gov/grants/guide/r…
5
Check out the new study from #NIHHighRisk researchers, which found links between inherited #genes and cancer severity that may help predict #cancer risk and deepen our understanding of how our immune system fights off tumors. Read more: med.stanford.edu/news/all-news/…
1
It’s not too late to register to attend our June 7th public webinar to hear what community partners had to say about the future of #ClinicalResearch in #PrimaryCare. Want to see how their input informed NIH’s vision of the future? Register today! bit.ly/3R8DIwD
0
The GlyGen glycan model made an appearance at the Bruker ASMS booth. Come visit the booth.
17
Will you be at #ASMS2024 this week in #Anaheim? Be sure to catch up with #A2CPS researcher Panshak Dakup, presenting his poster on a quantitative assay using targeted #proteomics - Tues Jun 3 at 10:30
1
Our latest @sennetresearch manuscript on #senescence, "SenNet recommendations for detecting senescent cells in different tissues", has just been published with @SpringerNature in @NatRevMCB. Read here: rdcu.be/dJMUA
15
📢D-1📢 Deadline approaching: #PCORI seeks to fund patient-centered CER studies focused on rare diseases! Up to $100M in available funding! Explore new PFA today and see how you can take the first step: pcori.me/3SFCmJl Up to $100M in available funding!
2
Project Pitch is currently open for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
1
Abstract submission for INCF 2024 has been extended until June 7! Register now: bit.ly/4dLheLI #NIH_SPARC @INCForg #OpenData
2
New work from #NIHHighRisk researchers has found potential #genetic biomarkers to predict #cancer malignancy that could help predict and treat breast cancer: science.org/doi/10.1126/sc…
3
SPARC has been featured in the newest issue of MIT Technology Review! Read how the SPARC program has provided crucial details on the peripheral nervous system's electrical aspects: bit.ly/4c2evvN #OpenScience @techreview #NIH_SPARC @ABI_bioeng @genecivillico
4
Join us for the 2nd installment of our new webinar series featuring resources & tools within the #NIH_CFDE @CFDEKC @AviMaayan @CfdeWorkbench @LINCSProgram
7
Neuroblastoma accounts for 6% of all childhood #Cancer in the United States, and about 90% of neuroblastoma is found in children younger than 5. Early detection is key. #CureChildhoodCancer #UnderstandingNeuroblastoma
4
Don't miss your chance to learn about #NIH_CFDE #data resources and a new platform for querying the Gene Expression Omnibus (GEO) with #gene sets! Tune in to this webinar on Fri 5/31 at 1PM ET. Learn more: bit.ly/3vX6iJK
1
Register today to join the conversation on June 7th beginning at 10:00 AM ET about how NIH will take action to improve #access to #ClinicalResearch in #PrimaryCare to boost the health of Americans. bit.ly/3R8DIwD
1
Dr. Macefield (@vgmacefield) is also co-Investigator on a #NIH_SPARC project about #VNS vagus nerve stimulation. Looking forward to sharing data from this large, international effort when it is available on the SPARC Portal (sparc.science
2
Did you miss the first ever IMPC Spring meeting in Cape Town in South Africa, titled ‘Beyond the Genome’? Don't worry, you can now access the recordings of the conference! For more: mousephenotype.org/news/beyond-th…
2
One week just wasn’t enough. We’re extending again! Submit your abstract to Assembly by Jun 7: bit.ly/INCFabstracts Who will you get to see? Stay tuned for our speaker announcement thread! And of course, register while early bird prices still apply: bit.ly/INCFAssembly20…
4
Mark your calendars for the #Bridge2AI AI READI monthly webinar! Learn about the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom on 6/18 at 3PM ET: bit.ly/4arolWV.
2
Prepare for a major-league panel moderated by Dr. Adam Resnick, a leader in science for the Kids First Data Resource Center—at the #KidsFirst Spring Webinar. Discover his vision for pediatric research. Today is your last chance to register: buff.ly/3JYlslA @NIH_CommonFund
3
Only 1 month left to submit your #BiomedicalResearch proposals using #NIH_CommonFund #data! Apply to this #FundingOpportunity with #NIH_CFDE by 6/27. go.nih.gov/e2d3YMc
1
Join us for a June 7th public webinar as we discuss what #doctors, #patients, #hospitals and #researchers said about enhancing #access to #ClinicalResearch to improve the health of Americans. bit.ly/3R8D9lwd
3
📢D-7📢 Deadline approaching: #PCORI seeks to fund patient-centered CER studies focused on rare diseases! Up to $100M in available funding! Explore new PFA today and see how you can take the first step: pcori.me/3SFCmJl Up to $100M in available funding!
2
CBIO Zambia theme team took best Africa Day Poster prize, Science Presentation prize and overall winners!
3
Celebrating Africa day with IBMS, CBIO and DS-I Africa/H3Africa Coordinating Centre at UCT
3
Happy #AfricaDay2024!🌍 Celebrating the formation of the OAU in 1963 & the remarkable journey of African unity. Proud to recognize the transformative contributions of our H3Africa and @DSI_Africa teams in genomics and data science! 🧬🔍 #AfricanUnion #H3Africa #DSIAfrica #NIH
2
If you have ideas for how to make #neuromodulation data more #FAIR, submit your idea for the #NIH_SPARC annual #codeathon by June 8! bit.ly/436EHlt
3
Early bird registration for ISAN 2024 closes on Monday, May 27th. Register today! bit.ly/4byvjKU #NIH_SPARC #OpenData #ISAN2024 #OpenScience
0
There are now over 7,000 publications citing the IMPC! These publications include studies utilising mouse mutant products created by IMPC centers and the freely accessible phenotyping data on the IMPC website. For more: mousephenotype.org/news/a-new-mil… #IMPC #publications #mousegenetics
5
The recordings of the Virtual GlyGen and Common Fund Data Ecosystem (CFDE) Bioinformatics Workshop on May 1st 2024 has been released on YouTube. Have a look to learn about Bioinformatics, GlyGen and CFDE. youtube.com/playlist?list=…
1
Interested in learning about #biomedical #datasets? Join the #NIH_CFDE program for an upcoming #webinar to learn about #data resources and a new platform for querying the Gene Expression Omnibus (GEO) with #gene sets on Fri 5/31 at 1PM ET. Learn more: bit.ly/3vX6iJK
2
Project Pitch is currently open for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
0
Don't miss valuable updates from NIH and extensive funding opportunities at the #KidsFirst Spring Webinar! Join Dr. Marcia Fournier as she explores what’s latest and greatest with the Kids First program. Save your spot: buff.ly/3JYlslA @NIH_CommonFund #togetherwerise
1
Join the second @NIH_CommonFund Public Webinar on Friday, May 31st. Learn about new bioinformatics tools from the LINCS DCC and the CFDE DRC, presented by Dr. Avi Ma’ayan, and discover the RummaGEO search engine with Giacomo Marino. Register now: bit.ly/4bNPswb #OpenData
1
Join Dr. David Higgins & Dr. Jared Rozowsky for an impactful live demo at the #KidsFirst Spring Webinar. Learn how the new variant search tool expands data exploration. Plus, discover how to perform cloud-based analysis with CAVATICA: buff.ly/3JYlslA @NIH_CommonFund
0
One Week Away! Don't miss the #KidsFirst and @kidsfirstDRC Spring Webinar: Big Data Dialogue, The Next Catalyst for Cures, May 29 from 11-12PM ET. Live demos and insightful discussions on transformative #pediatric research await. Register today: nih.zoomgov.com/meeting/regist…
0
Happening today at 12pm ET! Join us for a technical assistance webinar to discuss a #FundingOpportunity on Integrating #ClinicalResearch into #PrimaryCare. bit.ly/3Uw05gk
1
Abstract submission for the 2024 INCF Neuroinformatics Assembly closes TOMORROW. Don't miss your chance to participate! Register now: bit.ly/4dLheLI #NIH_SPARC @INCForg #OpenData
2
On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO rummageo.com register: cfde.info
20
Replying to @gioberardi1
@gioberardi1 presenting about @a2cps_pain and his secondary analysis on movement evoked pain at our annual retreat. @SutherlandPhD #painscience https://t.co/122vx4Kp3u
3
Plenty of awards for MC-IU at the HuBMAP Annual Meeting! Amazing work CNS team! @katycns @AndreasBueckle @_hubmap @IULuddy
7
Unlocking the mysteries of childhood diseases by studying #ChildhoodCancer and #CongenitalDisorders together, #KidsFirstDRC and #KidsFirst researchers find common threads in the body's code. Together, we can fight for healthier futures.
2
New from #NIHHighRisk: scientists have found a new way to grow #kidney cells that can help learn more about important #genes and find new treatments for #KidneyDisease. Read more in the highlight: go.nih.gov/Ivt7Qfc
2
Register today for a technical webinar on May 22nd at noon ET. We will be discussing the open Research Opportunity Announcement for integrating #ClinicalResearch into #PrimaryCare. Register now bit.ly/3Uw05gk
2
Did you miss the webinar on the implementation of the simplified review framework for RPGs? The resources are now available! ▶ nexus.od.nih.gov/all/2024/05/15…
5
#KidsFirst virtual office hours are now held in collaboration with @velseraofficial and the #INCLUDEDCC. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: buff.ly/3qxhLwy @NIH_CommonFund
5
Join #KidsFirst and @kidsfirstDRC on May 29 from 11 AM-12PM ET for a transformative look into #pediatric research at the Spring Webinar, “Big Data Dialogue, The Next Catalyst for Cures.” Live demos & insightful discussions await. Register: nih.zoomgov.com/meeting/regist… #TogetherWeRise
1
Are you interested in #neurosurgery research? Check out this article by our #NIHHighRisk Research Program #NewInnovator awardee Shadi Dayeh and colleagues who developed a new tool to visualize brain activity. Learn more: pubmed.ncbi.nlm.nih.gov/38657026/
1
CNS- @AndreasBueckle at the HuBMAP All Hands Meeting: VisArts Center, Rockville, MD, May 14-16, 2024 showing what CNS is creating with the with Apple Vision Pro. hubmapconsortium.org @_hubmap @IULuddy
6
📸 Got an image that inspires? We're seeking captivating captures that showcase the artistry of #spatialbiology. Submit your mesmerizing tissue images using Akoya's technology for the chance to be featured on our platforms and a $100 Amazon gift card: bit.ly/3TfdR7x
19
Rummagene is a search engine for gene sets, created by extracting human and mouse gene sets from supporting materials of >120,000 biomedical research publications: nature.com/articles/s4200… @AviMaayan @MaayanLab
13
Always love to see new things from @AviMaayan et al. Rummaging through online papers in order to scrape the as of yet inaccessible supp tables is super smart. And such a good name (obviously). nature.com/articles/s4200…
21
Want to see how spatial profiling techniques have given biologists, including @_hubmap’s own Dr. Andrea Radtke from the #GermainLab and @NIAIDNews, never before seen views of cells and tissues? Then set your sights here: optica-opn.org/home/articles/…
2
Planning for #USASP2024? Be sure to catch #A2CPS investigator @torwager at a symposium, "Unlocking the Social Neuroscience of Pain: Trust, Learning, and Support" with Luana Colloca and Przemysław Bąbel on Mon at 3:30 - see you there!
8
📢 dkNET #Webinar Slides Now Available! #dkNET has slides available from the webinar on March 22, 2024 "Tabula Sapiens" presented by Dr. Angela Oliveira Pisco. #cellulardiversity #genome #humanatlas #transcriptome #geneexpression Slide link: slideshare.net/slideshow/dkne…
1
Thank you, @AACR, for another terrific annual meeting. We enjoyed sharing our research, learning from others, and connecting with the community of people working to advance #CancerResearch. We look forward to seeing you again next year! #AACR24 #NCIFuture
116
The NIH Common Fund is requesting research applications encouraging the use of Common Fund data. To be eligible, the proposed research must substantially leverage data from at least two Common Fund programs. grants.nih.gov/grants/guide/r…
4
Did you miss the #KidsFirst Pediatric Data Hour at #AARC24? It’s not too late to visit booth #3759 for a demo of the #Data Portal with the @kidsfirstDRC.
2
Have you registered for our #webinar on “Unlocking the Power of FAIR Data Sharing With ImmPort”? Check out the #dkNET blog below for info: dknet.org/about/blog/2729 #datasharing #FAIRdata #immunology #datamanagement
2
CBTN posters represented at #AACR2024 in San Diego! Dr. Ali Nabavizadeh of @ChildrensPhila, along with the translational imaging research team, utilize imaging and advanced bioinformatics methods to gain insights about pediatric #LGG biology to improve outcomes. #wearecbtn
29
Have you registered for next week's webinar on how the new simplified review framework will impact funding opportunities? 💭 Join NIH experts for live Q&A: go.nih.gov/S4hfVUq #NIHgrantsevents
5

Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

Check out the #KidsFirstDRC portal, a vast pediatric data resource for cancer and congenital disorders with over 100k records. It's linked with #CAVATICA for cloud-based analysis and sharing. Learn more in our FAQ: buff.ly/45qY9dR #PediatricHealth #DataScience #KidsFirst
4
Replying to @_hubmap
Blue = nuclei cyan = immune cells red = smooth muscle cells yellow = endothelial cells magenta = epithelial cells green = goblet cells
1
Once again, it’s time to test your intestinal fortitude with a gut-busting #CODEX image of the inner workings of your #intestines from #_hubmap researcher @johnhickey22. After some masticating & ruminating, you’re sure to get through to the bottom! @Stanford @GarryPNolan @DukeU
5
#NIHHighRisk is holding a pre-application webinar for the NIH Director's Pioneer Award on June 25, 2024, from 12:00-1:30 PM ET. See the funding announcement for more details: grants.nih.gov/grants/guide/r…
3
Learn more about how #ServiceDogs (#WorkingDogs) may help #veterans and #military service members manage symptoms of #PTSD. #PTSDAwarenessMonth
0
Ready to master the world of big data analysis? Join the Kids First CFDE Pediatric PowerUp this summer for an action-packed ramp-up into powerful cloud-based platforms! Register here: buff.ly/3VE1d32 #KidsFirst #CFDE #DataScience #KidsFirstCFDEPowerUp
1
Tune into @NIH #BuildUPTrust Challenge Demo Day, tomorrow, June 12th, for demonstrations and informational sessions from #CEAL and Common Fund’s #ComPASS, and announcements of the #BuildUPTrust finalists and honorable mentions at the end of the webinar! us02web.zoom.us/webinar/regist…
1
Interested in conducting #CommunityEngaged Research? Attend the Grant Writing for Success Webinar by the Community Engagement Alliance Consultative Resource #CEACR & Community Partnerships to Advance Science for Society #ComPASS on 6/12 at 1 PM ET us06web.zoom.us/webinar/regist…
2
Please join us this Thursday (06/13/24) at 1 p.m. ET for UDN Grand Rounds hosted by the Harvard Teaching Hospitals. View the full schedule and register harvard.zoom.us/webinar/regist…………… #FreeCME #GrandRounds
4
The #NIHHighRisk Early Independence Award is hosting a pre-application webinar on June 26 at 1 PM EDT. Register now to learn about this opportunity to kick-start an independent research career. More detail: grants.nih.gov/grants/guide/r…
3
Tune in next week for the #Bridge2AI AI READI monthly webinar! Hear Dr. Abramoff discuss the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom on 6/18 at 3PM ET: bit.ly/4arolWV.
0
Registration is now open for the Nuclear Architecture Meeting hosted by #4DNucleome, which will be held in San Diego, CA on Dec 11-13, 2024. This meeting is open to the public. Register and submit an abstract today: bit.ly/3X9gha0
8
Participant 224: Male, age 5 with a heart defect, brain abnormalities, and global developmental delay, partially caused by changes in the #RBM28 gene. Reach out if you know of others with similar symptoms and variants! undiagnosed.hms.harvard.edu/participants/p…
1
Project Pitch is closing Monday, June 17 for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Use SPARC tools and data in creative ways. bit.ly/436EHlt #data #openscience #code
3
I see glycans everywhere.
12
H3Africa/@DSI_Africa Coordinating Centre PI @MichelleSkelt18 attends the Egyptian Genome Symposium at the Africa Health Excon. #DSIAfrica #H3Africa #NIH
2
H3Africa members attend the 2nd Undiagnosed Hackathon in Nijmegen, The Netherlands. #H3Africa #NIH
0
Did you hear the news today about the launch of the CARE for Health™ initiative? Join us tomorrow 10am-12:30pm ET as @NIHDirector Dr. Monica Bertagnolli talks more about #NIH activities to expand access to #ClinicalResearch through #PrimaryCare. Register: bit.ly/3R8DIwD
2
Interested in #opportunities in #ClinicalResearch and #HealthEquity? Dr. Monica Bertagnolli, @NIHDirector, discusses in an editorial in @ScienceMagazine a new initiative called CARE for Health™ that's meant to connect the lab, clinic, and community. science.org/doi/10.1126/sc…
21
Today, the @NIH announced a new Common Fund program to address #ClinicalResearch #equity. Read about Communities Advancing Research Equity for Health™ (CARE for Health™) in the official press release. #CAREforHealth
0
The GlyGen-CFDE summer internship has started this week. Five students will be learning about and working on Glycosciences&CFDE projects for the next 8 weeks. @CfdeNih
5
#NIHHighRisk is holding a Transformative Research Award pre-application webinar on June 26, 2024, from 3:30-5:00 PM EDT. Registration link and more detail can be found in the funding announcement: grants.nih.gov/grants/guide/r…
7
This virtual series reviews updates in the OpenNerve Platform, an open-source implantable device that stimulates & records the peripheral nervous system, with a focus on the vagus and sacral nerves. Watch the webinar on-demand now. youtu.be/9QbOBOO5BNE?fe… #NIH_SPARC #opendata
2
Idea submissions and team lead signups close this weekend on June 8 for the #NIH_SPARC #FAIRData codeathon! Submit your ideas on #DataVisualization, #ComputationalModels, and other analysis tools today. bit.ly/436EHlt
2
SPARC is an open repository for peripheral nervous system and systems physiology data, models, and devices. For a limited time, SPARC is waiving fees for curation and publication of data contributions that fit our mission. Read more: bit.ly/3wQNhJB #NIH_SPARC #OpenData
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Register today for the #NIHHighRisk program’s New Innovator Award pre-application webinar on June 25 from 2-3:30 PM ET to learn about the award and the innovative, high-impact projects it supports. Learn more: grants.nih.gov/grants/guide/r…
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Would you like to learn how to obtain IMPC data by constructing simple Apache Solr API queries? If you're interested and you missed the IMPC Data API Workshop, the recording is now live on our YouTube Channel - IMPC Outreach! More: mousephenotype.org/blog/2024/04/1… #IMPC #Data #API #Solr
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Thanks so much @ksluka0101 for crossing the Atlantic and sharing your research of biomarkers and predictors of the transition to #chronicpain. #BPSASM2024
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Interested in pursuing high-risk, pioneering research? Save the date for June 25, 2024, from 12:00-1:30 PM ET for the #NIHHighRisk Pioneer Award pre-application webinar. See the announcement for more details: grants.nih.gov/grants/guide/r…
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Check out the new study from #NIHHighRisk researchers, which found links between inherited #genes and cancer severity that may help predict #cancer risk and deepen our understanding of how our immune system fights off tumors. Read more: med.stanford.edu/news/all-news/…
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It’s not too late to register to attend our June 7th public webinar to hear what community partners had to say about the future of #ClinicalResearch in #PrimaryCare. Want to see how their input informed NIH’s vision of the future? Register today! bit.ly/3R8DIwD
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The GlyGen glycan model made an appearance at the Bruker ASMS booth. Come visit the booth.
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Will you be at #ASMS2024 this week in #Anaheim? Be sure to catch up with #A2CPS researcher Panshak Dakup, presenting his poster on a quantitative assay using targeted #proteomics - Tues Jun 3 at 10:30
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Our latest @sennetresearch manuscript on #senescence, "SenNet recommendations for detecting senescent cells in different tissues", has just been published with @SpringerNature in @NatRevMCB. Read here: rdcu.be/dJMUA
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📢D-1📢 Deadline approaching: #PCORI seeks to fund patient-centered CER studies focused on rare diseases! Up to $100M in available funding! Explore new PFA today and see how you can take the first step: pcori.me/3SFCmJl Up to $100M in available funding!
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Project Pitch is currently open for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
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Abstract submission for INCF 2024 has been extended until June 7! Register now: bit.ly/4dLheLI #NIH_SPARC @INCForg #OpenData
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New work from #NIHHighRisk researchers has found potential #genetic biomarkers to predict #cancer malignancy that could help predict and treat breast cancer: science.org/doi/10.1126/sc…
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SPARC has been featured in the newest issue of MIT Technology Review! Read how the SPARC program has provided crucial details on the peripheral nervous system's electrical aspects: bit.ly/4c2evvN #OpenScience @techreview #NIH_SPARC @ABI_bioeng @genecivillico
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Join us for the 2nd installment of our new webinar series featuring resources & tools within the #NIH_CFDE @CFDEKC @AviMaayan @CfdeWorkbench @LINCSProgram
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Neuroblastoma accounts for 6% of all childhood #Cancer in the United States, and about 90% of neuroblastoma is found in children younger than 5. Early detection is key. #CureChildhoodCancer #UnderstandingNeuroblastoma
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Don't miss your chance to learn about #NIH_CFDE #data resources and a new platform for querying the Gene Expression Omnibus (GEO) with #gene sets! Tune in to this webinar on Fri 5/31 at 1PM ET. Learn more: bit.ly/3vX6iJK
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Register today to join the conversation on June 7th beginning at 10:00 AM ET about how NIH will take action to improve #access to #ClinicalResearch in #PrimaryCare to boost the health of Americans. bit.ly/3R8DIwD
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Dr. Macefield (@vgmacefield) is also co-Investigator on a #NIH_SPARC project about #VNS vagus nerve stimulation. Looking forward to sharing data from this large, international effort when it is available on the SPARC Portal (sparc.science
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Did you miss the first ever IMPC Spring meeting in Cape Town in South Africa, titled ‘Beyond the Genome’? Don't worry, you can now access the recordings of the conference! For more: mousephenotype.org/news/beyond-th…
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One week just wasn’t enough. We’re extending again! Submit your abstract to Assembly by Jun 7: bit.ly/INCFabstracts Who will you get to see? Stay tuned for our speaker announcement thread! And of course, register while early bird prices still apply: bit.ly/INCFAssembly20…
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Mark your calendars for the #Bridge2AI AI READI monthly webinar! Learn about the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom on 6/18 at 3PM ET: bit.ly/4arolWV.
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Prepare for a major-league panel moderated by Dr. Adam Resnick, a leader in science for the Kids First Data Resource Center—at the #KidsFirst Spring Webinar. Discover his vision for pediatric research. Today is your last chance to register: buff.ly/3JYlslA @NIH_CommonFund
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Only 1 month left to submit your #BiomedicalResearch proposals using #NIH_CommonFund #data! Apply to this #FundingOpportunity with #NIH_CFDE by 6/27. go.nih.gov/e2d3YMc
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Join us for a June 7th public webinar as we discuss what #doctors, #patients, #hospitals and #researchers said about enhancing #access to #ClinicalResearch to improve the health of Americans. bit.ly/3R8D9lwd
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📢D-7📢 Deadline approaching: #PCORI seeks to fund patient-centered CER studies focused on rare diseases! Up to $100M in available funding! Explore new PFA today and see how you can take the first step: pcori.me/3SFCmJl Up to $100M in available funding!
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CBIO Zambia theme team took best Africa Day Poster prize, Science Presentation prize and overall winners!
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Celebrating Africa day with IBMS, CBIO and DS-I Africa/H3Africa Coordinating Centre at UCT
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Happy #AfricaDay2024!🌍 Celebrating the formation of the OAU in 1963 & the remarkable journey of African unity. Proud to recognize the transformative contributions of our H3Africa and @DSI_Africa teams in genomics and data science! 🧬🔍 #AfricanUnion #H3Africa #DSIAfrica #NIH
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If you have ideas for how to make #neuromodulation data more #FAIR, submit your idea for the #NIH_SPARC annual #codeathon by June 8! bit.ly/436EHlt
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Early bird registration for ISAN 2024 closes on Monday, May 27th. Register today! bit.ly/4byvjKU #NIH_SPARC #OpenData #ISAN2024 #OpenScience
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There are now over 7,000 publications citing the IMPC! These publications include studies utilising mouse mutant products created by IMPC centers and the freely accessible phenotyping data on the IMPC website. For more: mousephenotype.org/news/a-new-mil… #IMPC #publications #mousegenetics
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The recordings of the Virtual GlyGen and Common Fund Data Ecosystem (CFDE) Bioinformatics Workshop on May 1st 2024 has been released on YouTube. Have a look to learn about Bioinformatics, GlyGen and CFDE. youtube.com/playlist?list=…
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Interested in learning about #biomedical #datasets? Join the #NIH_CFDE program for an upcoming #webinar to learn about #data resources and a new platform for querying the Gene Expression Omnibus (GEO) with #gene sets on Fri 5/31 at 1PM ET. Learn more: bit.ly/3vX6iJK
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Project Pitch is currently open for the 2024 SPARC FAIR Codeathon! Show off your coding skills in this 3-day virtual challenge! It's free to enter, and there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
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Don't miss valuable updates from NIH and extensive funding opportunities at the #KidsFirst Spring Webinar! Join Dr. Marcia Fournier as she explores what’s latest and greatest with the Kids First program. Save your spot: buff.ly/3JYlslA @NIH_CommonFund #togetherwerise
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Join the second @NIH_CommonFund Public Webinar on Friday, May 31st. Learn about new bioinformatics tools from the LINCS DCC and the CFDE DRC, presented by Dr. Avi Ma’ayan, and discover the RummaGEO search engine with Giacomo Marino. Register now: bit.ly/4bNPswb #OpenData
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Join Dr. David Higgins & Dr. Jared Rozowsky for an impactful live demo at the #KidsFirst Spring Webinar. Learn how the new variant search tool expands data exploration. Plus, discover how to perform cloud-based analysis with CAVATICA: buff.ly/3JYlslA @NIH_CommonFund
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One Week Away! Don't miss the #KidsFirst and @kidsfirstDRC Spring Webinar: Big Data Dialogue, The Next Catalyst for Cures, May 29 from 11-12PM ET. Live demos and insightful discussions on transformative #pediatric research await. Register today: nih.zoomgov.com/meeting/regist…
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Happening today at 12pm ET! Join us for a technical assistance webinar to discuss a #FundingOpportunity on Integrating #ClinicalResearch into #PrimaryCare. bit.ly/3Uw05gk
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Abstract submission for the 2024 INCF Neuroinformatics Assembly closes TOMORROW. Don't miss your chance to participate! Register now: bit.ly/4dLheLI #NIH_SPARC @INCForg #OpenData
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On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO rummageo.com register: cfde.info
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Replying to @gioberardi1
@gioberardi1 presenting about @a2cps_pain and his secondary analysis on movement evoked pain at our annual retreat. @SutherlandPhD #painscience https://t.co/122vx4Kp3u
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Plenty of awards for MC-IU at the HuBMAP Annual Meeting! Amazing work CNS team! @katycns @AndreasBueckle @_hubmap @IULuddy
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Unlocking the mysteries of childhood diseases by studying #ChildhoodCancer and #CongenitalDisorders together, #KidsFirstDRC and #KidsFirst researchers find common threads in the body's code. Together, we can fight for healthier futures.
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New from #NIHHighRisk: scientists have found a new way to grow #kidney cells that can help learn more about important #genes and find new treatments for #KidneyDisease. Read more in the highlight: go.nih.gov/Ivt7Qfc
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Register today for a technical webinar on May 22nd at noon ET. We will be discussing the open Research Opportunity Announcement for integrating #ClinicalResearch into #PrimaryCare. Register now bit.ly/3Uw05gk
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Did you miss the webinar on the implementation of the simplified review framework for RPGs? The resources are now available! ▶ nexus.od.nih.gov/all/2024/05/15…
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#KidsFirst virtual office hours are now held in collaboration with @velseraofficial and the #INCLUDEDCC. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: buff.ly/3qxhLwy @NIH_CommonFund
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Join #KidsFirst and @kidsfirstDRC on May 29 from 11 AM-12PM ET for a transformative look into #pediatric research at the Spring Webinar, “Big Data Dialogue, The Next Catalyst for Cures.” Live demos & insightful discussions await. Register: nih.zoomgov.com/meeting/regist… #TogetherWeRise
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Are you interested in #neurosurgery research? Check out this article by our #NIHHighRisk Research Program #NewInnovator awardee Shadi Dayeh and colleagues who developed a new tool to visualize brain activity. Learn more: pubmed.ncbi.nlm.nih.gov/38657026/
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CNS- @AndreasBueckle at the HuBMAP All Hands Meeting: VisArts Center, Rockville, MD, May 14-16, 2024 showing what CNS is creating with the with Apple Vision Pro. hubmapconsortium.org @_hubmap @IULuddy
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📸 Got an image that inspires? We're seeking captivating captures that showcase the artistry of #spatialbiology. Submit your mesmerizing tissue images using Akoya's technology for the chance to be featured on our platforms and a $100 Amazon gift card: bit.ly/3TfdR7x
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Rummagene is a search engine for gene sets, created by extracting human and mouse gene sets from supporting materials of >120,000 biomedical research publications: nature.com/articles/s4200… @AviMaayan @MaayanLab
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Always love to see new things from @AviMaayan et al. Rummaging through online papers in order to scrape the as of yet inaccessible supp tables is super smart. And such a good name (obviously). nature.com/articles/s4200…
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Want to see how spatial profiling techniques have given biologists, including @_hubmap’s own Dr. Andrea Radtke from the #GermainLab and @NIAIDNews, never before seen views of cells and tissues? Then set your sights here: optica-opn.org/home/articles/…
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Planning for #USASP2024? Be sure to catch #A2CPS investigator @torwager at a symposium, "Unlocking the Social Neuroscience of Pain: Trust, Learning, and Support" with Luana Colloca and Przemysław Bąbel on Mon at 3:30 - see you there!
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📢 dkNET #Webinar Slides Now Available! #dkNET has slides available from the webinar on March 22, 2024 "Tabula Sapiens" presented by Dr. Angela Oliveira Pisco. #cellulardiversity #genome #humanatlas #transcriptome #geneexpression Slide link: slideshare.net/slideshow/dkne…
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Thank you, @AACR, for another terrific annual meeting. We enjoyed sharing our research, learning from others, and connecting with the community of people working to advance #CancerResearch. We look forward to seeing you again next year! #AACR24 #NCIFuture
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The NIH Common Fund is requesting research applications encouraging the use of Common Fund data. To be eligible, the proposed research must substantially leverage data from at least two Common Fund programs. grants.nih.gov/grants/guide/r…
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Did you miss the #KidsFirst Pediatric Data Hour at #AARC24? It’s not too late to visit booth #3759 for a demo of the #Data Portal with the @kidsfirstDRC.
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Have you registered for our #webinar on “Unlocking the Power of FAIR Data Sharing With ImmPort”? Check out the #dkNET blog below for info: dknet.org/about/blog/2729 #datasharing #FAIRdata #immunology #datamanagement
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CBTN posters represented at #AACR2024 in San Diego! Dr. Ali Nabavizadeh of @ChildrensPhila, along with the translational imaging research team, utilize imaging and advanced bioinformatics methods to gain insights about pediatric #LGG biology to improve outcomes. #wearecbtn
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Have you registered for next week's webinar on how the new simplified review framework will impact funding opportunities? 💭 Join NIH experts for live Q&A: go.nih.gov/S4hfVUq #NIHgrantsevents
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