Discover, Analyze, and Integrate NIH Common Fund Data
The NIH Common Fund programs generate diverse datasets from a variety of projects ranging from genomics to phenotypes. The Common Fund Data Ecosystem (CFDE) aims to facilitate improved discovery, reuse, integration, and analyses of these datasets to form novel hypothesis for accelerating discoveries in biomedical research.
The Common Fund Data Ecosystem (CFDE) aims to enable broad use of data generated by Common Fund Programs to accelerate hypothesis generation and discovery.
TRAINING & OUTREACH
The HuBMAP JumpStart Fellowship
The HuBMAP JumpStart fellowship offers junior investigators working on human atlasing projects the opportunity to take a leadership role in conducting synergistic, collaborative research projects within the HuBMAP consortium. The goal of this program is to create a mentored, career development opportunity for promising junior researchers, and to promote collaboration among HuBMAP and the atlas-building community.
Starts: June 1, 2025
Making data more FAIR
The Data Resource and Knowledge Centers are dedicated to enhancing the accessibility and utility of Common Fund-generated data and resources, striving to uphold the FAIR principles. This commitment serves as a catalyst for groundbreaking biomedical discoveries, fostering synergies across the diverse datasets within the Common Fund ecosystem, thereby unlocking novel avenues of research and innovation.
Findable
Accessible
Interoperable
Reusable
Social Media
Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.
💡 This month's NHGRI Genomics Landscape edition featured researchers in the Undiagnosed Diseases Program. They discovered a new genetic condition: Morimoto-Ryu-Malicdan Neuromuscular Syndrome (MRMNS).
🔗 NHGRI Genomics Landscape- January 2025 Edition: bit.ly/4ahdd0a 
GlyGen.org release v2.7 is live! 🎉
New features:
• New organism: Bovine
• Full-screen detail tables
• Dynamic list page columns
• Enhanced download options
Release notes: wiki.glygen.org
#glycotime #bioinformatics 
Only 1 day left to register for the #ComplementARIE #FundingOpportunity informational webinar for #TechDev centers! Register now to hear from #NIH staff and ask questions: bit.ly/TechDevWebinar 
📢Save the date!
3 weeks until the 15th @AfSHG_Genetics & the 1st Ugandan Society of Human Genetics and Bioinformatics Conference
📍Entebbe, Uganda🇺🇬
🗓️ 3-7 Feb 2025
📌 Harnessing Data Science and AI for African Genomics 🧬
afshg2025.org
#AfSHG #Genetics #Africa 
One month left to submit your Letters of Intent to apply to the #ComplementARIE Data Hub and Coordinating Center #FundingOpportunity! Explore the announcement and submit your optional LOI before Feb 10 go.nih.gov/3MBEmGy 
New research from the #NIHCommonFund's #NIHHighRisk program is tracking #GutMicrobiome changes across stages of #ChronicFatigueSyndrome, potentially aiding clinicians in more accurate diagnoses. Learn more: go.nih.gov/xjlCyR8
#MEcfs #ChronicFatigue 
🎧 Tune In, another podcast is up!
Christine McGarvey teamed up with the Living Well Pod! 💡✨
🔗 Listen now on (bit.ly/3BZvK4v):
Apple Podcasts | Spotify | Amazon Music | Overcast | iHeartRadio | Castro | Castbox | Goodpods 
📅⏰ Time is running out! AI-READI is looking for #research interns in allied health for the Aug 2025 academic year! Interns will advance the field of #AI (#ML) and generate #data for the larger #Bridge2AI program. Apply by 1/17 for this #Internship Opp. bit.ly/3UvuGeK 
Kickstart your New Year’s fitness goals with insights from Dr. Euan Ashley, of the #MoTrPAC Bioinformatics Center Team. He discusses how exercise transforms tissue at a molecular level, offering clues on how it reverses disease effects across the body: bit.ly/4h4EbdF
Only one more week to register for the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity informational #webinar! Register now to get all the information needed to help you apply: bit.ly/NIOIWebinar 
Interested in responsible #AI for #healthcare? Tune in 1/21 at 3PM ET for this #NIHCommonFund #Bridge2AI discussion with staff from @StanfordMed about addressing #bias for #ethicalAI to improve #HealthEquity & patient outcomes. Learn more: bit.ly/40ncneT 
Check out the most recent UDN publication!
⭐️Key takeaway: FSASD is caused by #SLC17A5 variants, with this case revealing tissue-specific mosaicism for an intragenic deletion, explaining an atypical presentation.
pubmed.ncbi.nlm.nih.gov/39742826/
@UDNForg
The #NIHCommonFund #ComplementARIE program released a new #FundingOpportunity for a Coordinating Center and Data Hub! Learn how you can contribute to accelerating development of #NewApproachMethodologies today! go.nih.gov/3MBEmGy 
For undergraduates interested in cutting-edge senescence and aging research, this is a wonderful internship opportunity! Applications are due January 25th at link below.
@sennetresearch
Get your applications ready! There are two months left to apply to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems Funding Opportunity. Apply to be a part of the #VentureNIOI initiative! commonfund.nih.gov/venture/NIOI 
Can the state of your #GutMicrobiome help diagnose diseases like #ChronicFatigueSyndrome? An #NIHCommonFund #NIHHighRisk researcher found links between the microbiome and #MEcfs that may help predict disease onset and progression. Read more: go.nih.gov/xjlCyR8 
Only one week left until the #ComplementARIE informational webinar discussing the new #FundingOpp to build #NAMs Technology Development Centers! Register now to participate in the open Q&A session: bit.ly/TechDevWebinar 
After 7 yrs of training w multiple wearables and user reported data, we can now use probabilistic models to predict blood sugar WITHOUT sensors. JanuaryAI received the CES award:
ces.tech/ces-innovation…
🎉Congratulations!
Washingtonian's magazine which featured Dr. William Gahl and the entire UDP team was selected as Washingtonian’s Favorite Longreads of 2024!
Read more: bit.ly/3DJGynO
@UDNForg
Mark your calendars! The #NIHCommonFund is hosting a 2-day workshop on 3/11-3/12 to hear from the community about ideas to enable #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Register today! go.nih.gov/awiS2id 
Did you miss the abstract deadline? Late-breaking abstract submission for #APS2025 is now open! See SPARC at booth #1414. #NIH_SPARC #OpenScience @APSPhysiology bit.ly/4gZAYwM 
Check out the most recent UDN publication!
⭐️Key takeaway: #HADHB variants cause trifunctional protein deficiency with rare complications, including FSGS and bone marrow failure.
pubmed.ncbi.nlm.nih.gov/39723123/
@UDNForg
📢Reminder to apply for the GlyGen-CFDE Summer '25 @GWU - tinyurl.com/38b9xphz. 4 paid internship positions in DC - work with cutting-edge biodata tools & gain real research experience! Check the flyer below & apply by Jan 20 🧬 #Bioinformatics #STEM #glycotime 
Check out the most recent UDN publication!
⭐️Key takeaway: Rare damaging variants in #DDX53 are linked to autism, highlighting its role in genetic testing and challenges for murine ASD models.
pubmed.ncbi.nlm.nih.gov/39706195/
@UDNForg
Only 2 more weeks to register for the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity informational #webinar! Register now to learn more and participate in the Q&A session: bit.ly/NIOIWebinar 
Just in time for your holiday reading!! Our senescent cell signature of the lung is out @TriStateSenNet @sennetresearch @EuxhenH @PittDeptofMed. SenSet, a novel human lung senescence cell gene signature, identifies cell-specific senescence mechanisms biorxiv.org/content/10.110…
Looking for a new resource to kickstart your 2025 research? Start with the Kids First Data Resource Portal! Build virtual cohorts from 188K+ pediatric samples, including whole genome sequencing & RNA-Sequencing data: rebrand.ly/mdfczmq #DataDriven #KidsFirstPortal 
Happy holidays from the GlyGen team! 🍡 May the last days of this year be filled with great joy and may the new year bring many opportunities for us to advance glycobiology together! #GlyGen #Glycoscience #glycotime 
Researchers! Discover new funding opportunities for #OpenScience & #OpenData projects on the SPARC Portal! The funding page is constantly updated with the latest announcements, so you don't miss out. Check it out here: bit.ly/SPARCfunding #NIH_SPARC #OpenData #OpenScience
Check out the most recent UDN publication!
⭐️Key takeaway: A novel #KIF21A variant (p.Leu664Pro) disrupts #TUBB3 binding, causing neuropathy, brain anomalies, developmental delay, and strabismus without #CFEOM.
@UDNForg
pubmed.ncbi.nlm.nih.gov/39643435/
RefMet molecule page layout now contains sections covering nomenclature, molecular descriptors,chemical/biochemical classification, distribution info for NMDR studies (including species and tissue plots), external identifiers to other databases and MS/NMR spectra of standards. 
Want to learn more about the #NIHCommonFund’s Advancing Non-Invasive #Optical #Imaging Approaches for Biological Systems #FundingOpportunity? Join the informational #webinar January 16th at 1 PM ET. Register: bit.ly/NIOIWebinar 
📅 Save the date for the #NIH_CFDE program's virtual workshop 1/31 from 10AM to 2PM ET! Discover how the #NIHCommonFund's #DataEcosystem empowers discovery through open access #data & resources for the #biomedical #research community. Register: bit.ly/3vX6iJK 
Are you interested in using #genomic and #phenotypic data for #pediatric research? A #FundingOpportunity from the #NIHCommonFund's Gabriella Miller #KidsFirst program co-led by @theNCI & @NICHD_NIH opens Jan 16th, 2025: go.nih.gov/oDE9bWv
#BirthDefects #ChildhoodCancers 
Human tumor atlases and related data, including sequencing, imaging, and clinical information, are available to the community in the #HTAN Data Portal. data.humantumoratlas.org/explore 
The #NIH_CFDE is is making #NIHCommonFund data sets more findable, accessible, interoperable, and reusable (#FAIR)! Learn how @orau will support the #DataEcosystem through a #training center to help users work with the #data: bit.ly/4gj771t
Are you a #biomedical researcher studying #NewApproachMethodologies? The NIH #ComplementARIE program wants to hear from you! Explore the new #FundingOpportunity to help build #TechnologyDevelopment centers for #NAMs go.nih.gov/gz5JDK6 
We’re thrilled to announce the launch of our new Blue Sky page!
If you already have an account, follow us and share with your networks!
Let's build and grow our community together. Stay connected for updates, collaborations, and more.
📌 Follow us at bsky.app/profile/dsi-af… 📌 
Check out the most recent UDN publication!
⭐️Key takeaway: Telehealth exams in the UDN showed strong consistency with in-person evaluations, minimal diagnostic misses, and high patient satisfaction.
pubmed.ncbi.nlm.nih.gov/39629753/
@UDNForg
Discover how mass spectrometry is revolutionizing vaccine development and infectious disease research! Watch Dr. John Cipollo's insightful GlyGen Webinar now: youtu.be/-5e8MaD8yKI
Don't forget to follow and subscribe for more cutting-edge science content! 🔔
#FDA #glycotime
#NIH_SPARC community members map pain-sensing nerves in rat hearts for the first time! This breakthrough paves the way for future research on heart disease. Learn more: tab.so/264edc30 #OpenScience 
🔬🧠 Oh synapse! Using #CryoET resources supported by #NIHCommonFund, researchers reveal how synapse shape drives #neuron communication at the molecular level. These findings could shed light on #brain disorders like #Alzheimers and #Parkinsons disease: go.nih.gov/RHERowD 
Did you miss the #KidsFirst New Research Gold Rush at #ASHG2024? Now you can feel like you're there. Watch the video NIH Research Gold Rush Poster Session & Networking Reception at ASHG 2024 rebrand.ly/kyrjxp3 @NIH_CommonFund
📢 Did you forget to submit your #AI (#ArtificialIntelligence) abstracts for the upcoming @Bridge2aiVoice Symposium? You're in luck, the deadline has been extended to 12/23! Don't miss your chance to submit to this #NIHCommonFund #Bridge2AI event.
Interested in applying to the #ComplementARIE #NewApproachMethodologies Technology Development Centers #FundingOpp? Join the informational #webinar on 1/14/25 at 11am ET! bit.ly/TechDevWebinar 
Researchers from #NIH_SPARC created the first maps of #pain-sensing neurons in the #heart, laying the foundation to understand how these nerves change in #HeartDisease. SPARC is supported by the #NIHCommonFund. Learn more on the @sparc_science website: sparc.science/news-and-event… 
We’re grateful for our amazing research community and the partners who drive pediatric research forward every day. Thank you for joining us on this mission to improve the lives of children worldwide. Here’s to even more discoveries in the New Year! #Community #KidsFirstDRC 
The #NIHCommonFund #ComplementARIE program needs your help to build comprehensive #TechnologyDevelopment centers for novel #NewApproachMethodologies! Explore the new #FundingOpportunity: go.nih.gov/gz5JDK6 
Exciting News!!! 🎉The 8th Release of the Human Reference Atlas (v2.2) is now available! See what's new in HRA v2.2 in 8th Release Notes📷Visit: humanatlas.io for the new and updated data!!
@NIH
@_hubmap
@AndreasBueckle
@katycns
@_bh2 
The #NIHCommonFund’s #NIH_SPARC program is advancing #OpenScience to catalyze new #neuromodulation discoveries. Learn how the SPARC Portal provides cutting-edge information & tools for advancing bioelectronic medicine in a recent webinar featuring a @sparc_science researcher!
Participant 229: female, age 4, with low muscle tone, motor delays, speech and language delays, and autism and a variant in RNU4-2 gene. Reach out if you know of others with similar symptoms and variant!
undiagnosed.hms.harvard.edu/participants/p…
Exciting News! The deadline for the Call for Science for the 2025 Voice AI Symposium has been extended to December 23, 2024!
(eventsquid.com/event/26217)
Bridge2AI-Voice is part of the @Bridge2AI program funded by the NIH Common Fund. 
The #NIHCommonFund #ComplementARIE program released a new #FundingOpportunity! Explore the announcement and begin preparing your applications now: go.nih.gov/gz5JDK6 
Cell atlasing got the weight of the world on your shoulders? Explore the Atlases Galore & Method of the Year 2024: #SpatialProteomics @naturemethods articles out this week if you need a roadmap to success! Like their namesake, these atlases will hold up well! #CellMapCrew #HuBMAP
The #NIHCommonFund is hosting a workshop to discuss enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types! Join the virtual interactive discussion 3/11-3/12: go.nih.gov/awiS2id 
📢 Time is running out! Submit your #AI (#ArtificialIntelligence) abstracts for the upcoming @Bridge2aiVoice Symposium. #Bridge2AI #NIHCommonFund
8 billion. It's just a number. Today, our 3D tranche browser shows 8 billion* purchasable molecules in biologically relevant, docking-ready 3D formats.
cartblanche22.docking.org/tranches/3d
* Yes, yes, a wee bit of double counting. But, 8 billion!
Older adults face growing housing instability, with 168,000 over 65 evicted yearly. A new study by the #NIHCommonFund’s #NIHFIRST program shows that home foreclosures may speed #MemoryDecline. Learn how #HousingInstability impacts health & cognition: go.nih.gov/9fiR3D9 
Are you a #biomedical #researcher interested in human voice #data paired with other clinical information? Learn about this data set from the #NIHCommonFund #Bridge2AI's Voice #AI (@Bridge2aiVoice) project that aims to develop #biomarkers for disease using the human voice data
Ready to register for #APS2025? Don't forget to stop by the SPARC booth (#1414) in April. We'll be there to answer your questions and share the latest in open science. #NIH_SPARC #OpenScience @APSPhysiology bit.ly/4gZAYwM 
Tune in tomorrow (12/10) at 3 PM ET for the #NIHCommonFund's #Bridge2AI program discussion w/ Dr. Michelle Mello (@StanfordLaw & @StanfordMed) to hear about emerging legal trends in using #AI in #PatientCare. Learn more: bit.ly/3Vh1Y1F 
🚨 Last Call for Abstract Submissions! 🚨
Submit your abstract before time runs out:
👉 eventsquid.com/contestant-reg…
#VoiceAI #AIresearch #CallForScience #TechInnovation #VoiceTechnology #Bridge2AI #AIcommunity #AbstractDeadline #VoiceAI2025 
Today the week long @eLwazi_ODSP /@DSI_Africa Train-the-Trainer workshop commences!
Workshop will cover using the eLwazi training workflow, developing competency-based curricula and managing computational training environments
Looking forward to the impactful week! 
SPARC Community member Dr. Robert Gereau co-led a project that developed a promising implantable device for reversing opioid overdoses. This is a significant advancement in the effort to combat opioid misuse disorder. #NIH_SPARC #opioidcrisis #OpenScience science.org/doi/10.1126/sc… 
As we wrap up the year, let’s look back at the milestones achieved in pediatric research through the #KidsFirstDRC. From enhanced data resources to new search functionalities, we’ve made strides together. Stay tuned for continued progress in 2025! #PediatricResearch #YearInReview 
📢 Join us for the GlyGen Webinar Series! 🌟
🎙️ Speaker: Dr. John Cipollo, FDA
📅 Date: Dec 10, 2024
🕙 Time: 10 AM EST
🔍 Topic: Mass Spectrometry in Vaccines & Infectious Disease
Don't miss this insightful talk!
📖 Details: wiki.glygen.org
#glycotime 
Replying to @naturemethods
This month’s Technology Feature by Vivien Marx @metricausa highlights diverse international atlas projects, where they are now, and where they may be going in the future.
nature.com/articles/s4159… 
The wait is over!! We are thrilled to announce that we have chosen Spatial Proteomics as 2024’s Method of the Year! 🥳
For more on Spatial Proteomics and a road map to this special issue, please see this month’s Editorial or read on in this thread.
nature.com/articles/s4159… 
Our new peripheral DREADD is now available via @Addgene
Please RT
addgene.org/228902/
Paper @CellCellPress here:
cell.com/cell/abstract/…
Witness the latest pediatric research findings at the Kids First Winter Webinar: Champions of Discovery tomorrow, Dec 5th, at 10:30 AM ET. Register now: rebrand.ly/82yjs8q
#ChampionsofDiscovery #KidsFirstDRC 
Come join us for a webinar presented by Dr. Changhan He on Friday, December 6, 2024 to learn more about this useful tool exFINDER! tab.so/0bc18539 #OpenData #NIH_SPARC
@UCIrvine @dkNET_Info 
If you are attending Science Forum South Africa, please join us on Thursday, 05 Dec, for a sunrise session (07:30 am) on "Enhancing Health Outcomes Through Data Science: Conversations on Science for Society." #SFSA2024 @DSI_Africa @eLwazi_ODSP @UCTHealthSci @MRCza @synthymama, 
Want to learn more about the impact of social #bias on #ArtificialIntelligence (#AI) models used for hospital decision making (#EHR #data)? A new pilot from the #NIHCommonFund #Bridge2AI's @CHoRUS4AI team issues a caution to researchers: go.nih.gov/g8W2en3 
🚀 Call for Science is now open for the 2025 Voice AI Symposium in Tampa! Submit your work by **December 15th** for a chance to present at this premier event.
#VoiceAI #PosterCompetition #AIforGood #VoiceBiomarkers #HealthcareInnovation #CallForScience #TechFair #Symposium 
We are thrilled to announce the release of v1 of the Bridge2AI-Voice Dataset, marking a major step forward in using voice as a biomarker of health.
💡 Visit Health Data Nexus to learn more healthdatanexus.ai/content/b2ai-v…
#AIHealthcare #VoiceBiomarkers #Bridge2AI #Innovation #ethicalAI 
Are you interested in using #genomic and #phenotypic data for #pediatric research? The #FundingOpportunity from the Gabriella Miller #KidsFirst program co-led by #NIHCommonFund, @theNCI, & @NICHD_NIH opens Jan 16th, 2025: go.nih.gov/oDE9bWv
#BirthDefects #ChildhoodCancers 
Just a few days left to register for the #NuclearArchitecture Meeting hosted by #4DNucleome! Join us in San Diego, CA on December 11-13, 2024. The deadline to register is Monday, December 2nd. Register today! bit.ly/3X9gha0 
#NutritionforPrecisionHealth is advancing precision #nutrition and was featured on @CBSSunday! The study is led by a coalition of NIH partners, including #NIHCommonFund, the Office of Nutrition Research, and @AllofUsResearch. Enrollment is open! Watch here allof-us.org/3UY1zkm 
The 2025 Consortium Undergraduate Student Program (CUSP) is recruiting! Join us for summer internships focused on senescence study in a variety of research sites across the U.S.
More info and application at: sennetconsortium.org/internship/ 
Do you develop and market scientific tools? Join us tomorrow, November 22nd from 1-2 PM ET to learn various strategies from #COMPA and @MetaCell during our #CFDEPublicWebinarSeries. Register here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @NIH_CommonFund 
The @CfdeWorkbench team will showcase the #CFDE information portal (cfde.info), the #CFDE data portal (data.cfde.cloud), and #GeneSetCart (genesetcart.cfde.cloud) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC https://t.co/tgdMOPiAb6
It's almost time for #ASHG2024! Reminder, we have limited availability for exclusive 1:1 sessions at the #CFDE booth, grab yours before it's too late here: forms.gle/ioovRvfx3NA7SG…. Save travels and see you at Booth 571! @CfdeWorkbench @NIH_CommonFund 
Mark your calendars because we are ONE WEEK away from our #ASHG2024 Ancillary Session on the #CFDE! We look forward to seeing you all in Denver! @CfdeWorkbench @NIH_CommonFund @motrpac 
We are representing the Common Fund Data Ecosystem & debuting our #KnowledgeCenter Resource a #ASHG2024. Come by whenever (sign up below) to learn about how these 14 DCCs & 5 centers within the CFDE can be useful to you as a human geneticist @NIH_CommonFund @CfdeWorkbench
Join us in two weeks ✌️ at our #ASHG2024 ancillary session: A Human Geneticists' Guide to the Common Fund Data Ecosystem! Hear perspectives by the @NIH_CommonFund, us at the KC, @CfdeWorkbench, @motrpac and @GTExPortal. Hope to see you there! 
Join us this Friday for the #CFDEPublicWebinarSeries featuring #MoTrPAC. Dr. Matthew Wheeler, Jimmy Zhen, & David Jimenez-Morales will present on the Data Hub, general MoTrPAC updates, upcoming data releases, and their pipelines/database structure #CFDE @CfdeWorkbench 
Welcome to the ecosystem! The #KC is eager to work with the new #TrainingCenter & #CloudComputing teams @CfdeWorkbench @NIH_CommonFund
The Common Fund Data Ecosystem is hitting Denver this year, #ASHG2024. Visit our exhibition booth & learn about how the CFDE can support your research @CfdeWorkbench @NIH_CommonFund. 
The NIH Common Fund #Complement_ARIE program needs your help to build a new Data Hub and Coordinating Center for the #NewApproachMethodologies Common Fund program! Explore the Notice of Intent to Publish a #FundingOpportunity at go.nih.gov/K6kfgdb 
We're ONE day away from the next session of the #CFDEPublicWebinarSeries featuring Keyang Yu from
@exRNA @NIH_CommonFund! Details on joining can be found here: hugeamp.org/research.html?……
@CfdeWorkbench #NIHCommonFund #exRNA 
📢 Calling all researchers! The #dkNET Pilot #Funding Program invites multi-disciplinary teams to develop #AI foundation models for #Type2Diabetes.
LOI Due: Oct 11, 2024
Application Due: Nov 12, 2024
Don’t miss out on this chance! Apply Now: dknet.org/about/ai-pilot 
Learn how @WVCTSI will bring clinical research opportunities to rural communities in West Virginia as one of three new national hubs of the #CAREforHealth network: wvctsi.org/news/story?hea…
Join #NIH_CFDE on 8/30 at 1PM ET for an introduction webinar for Acute to #ChronicPain Signatures (@a2cps_pain). #A2CPS is an initiative to identify #biomarkers in pain science. Learn more: bit.ly/3vX6iJK 
Learn how our @somaticediting researchers & their colleagues engineered an adeno-associated virus (#AAV) that safely crosses the #BloodBrainBarrier, which can help prevent, treat, and cure brain disorders caused by genetic changes. @NIMHgov nimh.nih.gov/news/science-n…
Attending the #HealthITSummit24? Join Dr. Chris Kinsinger, #NIHCommonFund, on 9/19 for a panel discussion on #AI Adoption in the Health Care Ecosystem. #ArtificialIntelligence #Bridge2AI
Check out this year's winners of the #NIH_SPARC codeathon, who made new #FAIRdata visualization platforms, analysis pipelines, and #AI tools to enhance use of SPARC #neuromodulation data. Learn more about the projects: bit.ly/3AEai3K 
Social Media
Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.
💡 This month's NHGRI Genomics Landscape edition featured researchers in the Undiagnosed Diseases Program. They discovered a new genetic condition: Morimoto-Ryu-Malicdan Neuromuscular Syndrome (MRMNS).
🔗 NHGRI Genomics Landscape- January 2025 Edition: bit.ly/4ahdd0a
GlyGen.org release v2.7 is live! 🎉
New features:
• New organism: Bovine
• Full-screen detail tables
• Dynamic list page columns
• Enhanced download options
Release notes: wiki.glygen.org
#glycotime #bioinformatics
Only 1 day left to register for the #ComplementARIE #FundingOpportunity informational webinar for #TechDev centers! Register now to hear from #NIH staff and ask questions: bit.ly/TechDevWebinar
📢Save the date!
3 weeks until the 15th @AfSHG_Genetics & the 1st Ugandan Society of Human Genetics and Bioinformatics Conference
📍Entebbe, Uganda🇺🇬
🗓️ 3-7 Feb 2025
📌 Harnessing Data Science and AI for African Genomics 🧬
afshg2025.org
#AfSHG #Genetics #Africa
One month left to submit your Letters of Intent to apply to the #ComplementARIE Data Hub and Coordinating Center #FundingOpportunity! Explore the announcement and submit your optional LOI before Feb 10 go.nih.gov/3MBEmGy
New research from the #NIHCommonFund's #NIHHighRisk program is tracking #GutMicrobiome changes across stages of #ChronicFatigueSyndrome, potentially aiding clinicians in more accurate diagnoses. Learn more: go.nih.gov/xjlCyR8
#MEcfs #ChronicFatigue
🎧 Tune In, another podcast is up!
Christine McGarvey teamed up with the Living Well Pod! 💡✨
🔗 Listen now on (bit.ly/3BZvK4v):
Apple Podcasts | Spotify | Amazon Music | Overcast | iHeartRadio | Castro | Castbox | Goodpods
📅⏰ Time is running out! AI-READI is looking for #research interns in allied health for the Aug 2025 academic year! Interns will advance the field of #AI (#ML) and generate #data for the larger #Bridge2AI program. Apply by 1/17 for this #Internship Opp. bit.ly/3UvuGeK
Kickstart your New Year’s fitness goals with insights from Dr. Euan Ashley, of the #MoTrPAC Bioinformatics Center Team. He discusses how exercise transforms tissue at a molecular level, offering clues on how it reverses disease effects across the body: bit.ly/4h4EbdF
Only one more week to register for the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity informational #webinar! Register now to get all the information needed to help you apply: bit.ly/NIOIWebinar
Interested in responsible #AI for #healthcare? Tune in 1/21 at 3PM ET for this #NIHCommonFund #Bridge2AI discussion with staff from @StanfordMed about addressing #bias for #ethicalAI to improve #HealthEquity & patient outcomes. Learn more: bit.ly/40ncneT
Check out the most recent UDN publication!
⭐️Key takeaway: FSASD is caused by #SLC17A5 variants, with this case revealing tissue-specific mosaicism for an intragenic deletion, explaining an atypical presentation.
pubmed.ncbi.nlm.nih.gov/39742826/
@UDNForg
The #NIHCommonFund #ComplementARIE program released a new #FundingOpportunity for a Coordinating Center and Data Hub! Learn how you can contribute to accelerating development of #NewApproachMethodologies today! go.nih.gov/3MBEmGy
For undergraduates interested in cutting-edge senescence and aging research, this is a wonderful internship opportunity! Applications are due January 25th at link below.
@sennetresearch
Get your applications ready! There are two months left to apply to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems Funding Opportunity. Apply to be a part of the #VentureNIOI initiative! commonfund.nih.gov/venture/NIOI
Can the state of your #GutMicrobiome help diagnose diseases like #ChronicFatigueSyndrome? An #NIHCommonFund #NIHHighRisk researcher found links between the microbiome and #MEcfs that may help predict disease onset and progression. Read more: go.nih.gov/xjlCyR8
Only one week left until the #ComplementARIE informational webinar discussing the new #FundingOpp to build #NAMs Technology Development Centers! Register now to participate in the open Q&A session: bit.ly/TechDevWebinar
After 7 yrs of training w multiple wearables and user reported data, we can now use probabilistic models to predict blood sugar WITHOUT sensors. JanuaryAI received the CES award:
ces.tech/ces-innovation…
🎉Congratulations!
Washingtonian's magazine which featured Dr. William Gahl and the entire UDP team was selected as Washingtonian’s Favorite Longreads of 2024!
Read more: bit.ly/3DJGynO
@UDNForg
Mark your calendars! The #NIHCommonFund is hosting a 2-day workshop on 3/11-3/12 to hear from the community about ideas to enable #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Register today! go.nih.gov/awiS2id
Did you miss the abstract deadline? Late-breaking abstract submission for #APS2025 is now open! See SPARC at booth #1414. #NIH_SPARC #OpenScience @APSPhysiology bit.ly/4gZAYwM
Check out the most recent UDN publication!
⭐️Key takeaway: #HADHB variants cause trifunctional protein deficiency with rare complications, including FSGS and bone marrow failure.
pubmed.ncbi.nlm.nih.gov/39723123/
@UDNForg
📢Reminder to apply for the GlyGen-CFDE Summer '25 @GWU - tinyurl.com/38b9xphz. 4 paid internship positions in DC - work with cutting-edge biodata tools & gain real research experience! Check the flyer below & apply by Jan 20 🧬 #Bioinformatics #STEM #glycotime
Check out the most recent UDN publication!
⭐️Key takeaway: Rare damaging variants in #DDX53 are linked to autism, highlighting its role in genetic testing and challenges for murine ASD models.
pubmed.ncbi.nlm.nih.gov/39706195/
@UDNForg
Only 2 more weeks to register for the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity informational #webinar! Register now to learn more and participate in the Q&A session: bit.ly/NIOIWebinar
Just in time for your holiday reading!! Our senescent cell signature of the lung is out @TriStateSenNet @sennetresearch @EuxhenH @PittDeptofMed. SenSet, a novel human lung senescence cell gene signature, identifies cell-specific senescence mechanisms biorxiv.org/content/10.110…
Looking for a new resource to kickstart your 2025 research? Start with the Kids First Data Resource Portal! Build virtual cohorts from 188K+ pediatric samples, including whole genome sequencing & RNA-Sequencing data: rebrand.ly/mdfczmq #DataDriven #KidsFirstPortal
Happy holidays from the GlyGen team! 🍡 May the last days of this year be filled with great joy and may the new year bring many opportunities for us to advance glycobiology together! #GlyGen #Glycoscience #glycotime
Researchers! Discover new funding opportunities for #OpenScience & #OpenData projects on the SPARC Portal! The funding page is constantly updated with the latest announcements, so you don't miss out. Check it out here: bit.ly/SPARCfunding #NIH_SPARC #OpenData #OpenScience
Check out the most recent UDN publication!
⭐️Key takeaway: A novel #KIF21A variant (p.Leu664Pro) disrupts #TUBB3 binding, causing neuropathy, brain anomalies, developmental delay, and strabismus without #CFEOM.
@UDNForg
pubmed.ncbi.nlm.nih.gov/39643435/
RefMet molecule page layout now contains sections covering nomenclature, molecular descriptors,chemical/biochemical classification, distribution info for NMDR studies (including species and tissue plots), external identifiers to other databases and MS/NMR spectra of standards.
Want to learn more about the #NIHCommonFund’s Advancing Non-Invasive #Optical #Imaging Approaches for Biological Systems #FundingOpportunity? Join the informational #webinar January 16th at 1 PM ET. Register: bit.ly/NIOIWebinar
📅 Save the date for the #NIH_CFDE program's virtual workshop 1/31 from 10AM to 2PM ET! Discover how the #NIHCommonFund's #DataEcosystem empowers discovery through open access #data & resources for the #biomedical #research community. Register: bit.ly/3vX6iJK
Are you interested in using #genomic and #phenotypic data for #pediatric research? A #FundingOpportunity from the #NIHCommonFund's Gabriella Miller #KidsFirst program co-led by @theNCI & @NICHD_NIH opens Jan 16th, 2025: go.nih.gov/oDE9bWv
#BirthDefects #ChildhoodCancers
Human tumor atlases and related data, including sequencing, imaging, and clinical information, are available to the community in the #HTAN Data Portal. data.humantumoratlas.org/explore
The #NIH_CFDE is is making #NIHCommonFund data sets more findable, accessible, interoperable, and reusable (#FAIR)! Learn how @orau will support the #DataEcosystem through a #training center to help users work with the #data: bit.ly/4gj771t
Are you a #biomedical researcher studying #NewApproachMethodologies? The NIH #ComplementARIE program wants to hear from you! Explore the new #FundingOpportunity to help build #TechnologyDevelopment centers for #NAMs go.nih.gov/gz5JDK6
We’re thrilled to announce the launch of our new Blue Sky page!
If you already have an account, follow us and share with your networks!
Let's build and grow our community together. Stay connected for updates, collaborations, and more.
📌 Follow us at bsky.app/profile/dsi-af… 📌
Check out the most recent UDN publication!
⭐️Key takeaway: Telehealth exams in the UDN showed strong consistency with in-person evaluations, minimal diagnostic misses, and high patient satisfaction.
pubmed.ncbi.nlm.nih.gov/39629753/
@UDNForg
Discover how mass spectrometry is revolutionizing vaccine development and infectious disease research! Watch Dr. John Cipollo's insightful GlyGen Webinar now: youtu.be/-5e8MaD8yKI
Don't forget to follow and subscribe for more cutting-edge science content! 🔔
#FDA #glycotime
#NIH_SPARC community members map pain-sensing nerves in rat hearts for the first time! This breakthrough paves the way for future research on heart disease. Learn more: tab.so/264edc30 #OpenScience
🔬🧠 Oh synapse! Using #CryoET resources supported by #NIHCommonFund, researchers reveal how synapse shape drives #neuron communication at the molecular level. These findings could shed light on #brain disorders like #Alzheimers and #Parkinsons disease: go.nih.gov/RHERowD
Did you miss the #KidsFirst New Research Gold Rush at #ASHG2024? Now you can feel like you're there. Watch the video NIH Research Gold Rush Poster Session & Networking Reception at ASHG 2024 rebrand.ly/kyrjxp3 @NIH_CommonFund
📢 Did you forget to submit your #AI (#ArtificialIntelligence) abstracts for the upcoming @Bridge2aiVoice Symposium? You're in luck, the deadline has been extended to 12/23! Don't miss your chance to submit to this #NIHCommonFund #Bridge2AI event.
Interested in applying to the #ComplementARIE #NewApproachMethodologies Technology Development Centers #FundingOpp? Join the informational #webinar on 1/14/25 at 11am ET! bit.ly/TechDevWebinar
Researchers from #NIH_SPARC created the first maps of #pain-sensing neurons in the #heart, laying the foundation to understand how these nerves change in #HeartDisease. SPARC is supported by the #NIHCommonFund. Learn more on the @sparc_science website: sparc.science/news-and-event…
We’re grateful for our amazing research community and the partners who drive pediatric research forward every day. Thank you for joining us on this mission to improve the lives of children worldwide. Here’s to even more discoveries in the New Year! #Community #KidsFirstDRC
The #NIHCommonFund #ComplementARIE program needs your help to build comprehensive #TechnologyDevelopment centers for novel #NewApproachMethodologies! Explore the new #FundingOpportunity: go.nih.gov/gz5JDK6
Exciting News!!! 🎉The 8th Release of the Human Reference Atlas (v2.2) is now available! See what's new in HRA v2.2 in 8th Release Notes📷Visit: humanatlas.io for the new and updated data!!
@NIH
@_hubmap
@AndreasBueckle
@katycns
@_bh2
The #NIHCommonFund’s #NIH_SPARC program is advancing #OpenScience to catalyze new #neuromodulation discoveries. Learn how the SPARC Portal provides cutting-edge information & tools for advancing bioelectronic medicine in a recent webinar featuring a @sparc_science researcher!
Participant 229: female, age 4, with low muscle tone, motor delays, speech and language delays, and autism and a variant in RNU4-2 gene. Reach out if you know of others with similar symptoms and variant!
undiagnosed.hms.harvard.edu/participants/p…
Exciting News! The deadline for the Call for Science for the 2025 Voice AI Symposium has been extended to December 23, 2024!
(eventsquid.com/event/26217)
Bridge2AI-Voice is part of the @Bridge2AI program funded by the NIH Common Fund.
The #NIHCommonFund #ComplementARIE program released a new #FundingOpportunity! Explore the announcement and begin preparing your applications now: go.nih.gov/gz5JDK6
Cell atlasing got the weight of the world on your shoulders? Explore the Atlases Galore & Method of the Year 2024: #SpatialProteomics @naturemethods articles out this week if you need a roadmap to success! Like their namesake, these atlases will hold up well! #CellMapCrew #HuBMAP
The #NIHCommonFund is hosting a workshop to discuss enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types! Join the virtual interactive discussion 3/11-3/12: go.nih.gov/awiS2id
📢 Time is running out! Submit your #AI (#ArtificialIntelligence) abstracts for the upcoming @Bridge2aiVoice Symposium. #Bridge2AI #NIHCommonFund
8 billion. It's just a number. Today, our 3D tranche browser shows 8 billion* purchasable molecules in biologically relevant, docking-ready 3D formats.
cartblanche22.docking.org/tranches/3d
* Yes, yes, a wee bit of double counting. But, 8 billion!
Older adults face growing housing instability, with 168,000 over 65 evicted yearly. A new study by the #NIHCommonFund’s #NIHFIRST program shows that home foreclosures may speed #MemoryDecline. Learn how #HousingInstability impacts health & cognition: go.nih.gov/9fiR3D9
Are you a #biomedical #researcher interested in human voice #data paired with other clinical information? Learn about this data set from the #NIHCommonFund #Bridge2AI's Voice #AI (@Bridge2aiVoice) project that aims to develop #biomarkers for disease using the human voice data
Ready to register for #APS2025? Don't forget to stop by the SPARC booth (#1414) in April. We'll be there to answer your questions and share the latest in open science. #NIH_SPARC #OpenScience @APSPhysiology bit.ly/4gZAYwM
Tune in tomorrow (12/10) at 3 PM ET for the #NIHCommonFund's #Bridge2AI program discussion w/ Dr. Michelle Mello (@StanfordLaw & @StanfordMed) to hear about emerging legal trends in using #AI in #PatientCare. Learn more: bit.ly/3Vh1Y1F
🚨 Last Call for Abstract Submissions! 🚨
Submit your abstract before time runs out:
👉 eventsquid.com/contestant-reg…
#VoiceAI #AIresearch #CallForScience #TechInnovation #VoiceTechnology #Bridge2AI #AIcommunity #AbstractDeadline #VoiceAI2025
Today the week long @eLwazi_ODSP /@DSI_Africa Train-the-Trainer workshop commences!
Workshop will cover using the eLwazi training workflow, developing competency-based curricula and managing computational training environments
Looking forward to the impactful week!
SPARC Community member Dr. Robert Gereau co-led a project that developed a promising implantable device for reversing opioid overdoses. This is a significant advancement in the effort to combat opioid misuse disorder. #NIH_SPARC #opioidcrisis #OpenScience science.org/doi/10.1126/sc…
As we wrap up the year, let’s look back at the milestones achieved in pediatric research through the #KidsFirstDRC. From enhanced data resources to new search functionalities, we’ve made strides together. Stay tuned for continued progress in 2025! #PediatricResearch #YearInReview
📢 Join us for the GlyGen Webinar Series! 🌟
🎙️ Speaker: Dr. John Cipollo, FDA
📅 Date: Dec 10, 2024
🕙 Time: 10 AM EST
🔍 Topic: Mass Spectrometry in Vaccines & Infectious Disease
Don't miss this insightful talk!
📖 Details: wiki.glygen.org
#glycotime
Replying to @naturemethods
This month’s Technology Feature by Vivien Marx @metricausa highlights diverse international atlas projects, where they are now, and where they may be going in the future.
nature.com/articles/s4159…
The wait is over!! We are thrilled to announce that we have chosen Spatial Proteomics as 2024’s Method of the Year! 🥳
For more on Spatial Proteomics and a road map to this special issue, please see this month’s Editorial or read on in this thread.
nature.com/articles/s4159…
Our new peripheral DREADD is now available via @Addgene
Please RT
addgene.org/228902/
Paper @CellCellPress here:
cell.com/cell/abstract/…
Witness the latest pediatric research findings at the Kids First Winter Webinar: Champions of Discovery tomorrow, Dec 5th, at 10:30 AM ET. Register now: rebrand.ly/82yjs8q
#ChampionsofDiscovery #KidsFirstDRC
Come join us for a webinar presented by Dr. Changhan He on Friday, December 6, 2024 to learn more about this useful tool exFINDER! tab.so/0bc18539 #OpenData #NIH_SPARC
@UCIrvine @dkNET_Info
If you are attending Science Forum South Africa, please join us on Thursday, 05 Dec, for a sunrise session (07:30 am) on "Enhancing Health Outcomes Through Data Science: Conversations on Science for Society." #SFSA2024 @DSI_Africa @eLwazi_ODSP @UCTHealthSci @MRCza @synthymama,
Want to learn more about the impact of social #bias on #ArtificialIntelligence (#AI) models used for hospital decision making (#EHR #data)? A new pilot from the #NIHCommonFund #Bridge2AI's @CHoRUS4AI team issues a caution to researchers: go.nih.gov/g8W2en3
🚀 Call for Science is now open for the 2025 Voice AI Symposium in Tampa! Submit your work by **December 15th** for a chance to present at this premier event.
#VoiceAI #PosterCompetition #AIforGood #VoiceBiomarkers #HealthcareInnovation #CallForScience #TechFair #Symposium
We are thrilled to announce the release of v1 of the Bridge2AI-Voice Dataset, marking a major step forward in using voice as a biomarker of health.
💡 Visit Health Data Nexus to learn more healthdatanexus.ai/content/b2ai-v…
#AIHealthcare #VoiceBiomarkers #Bridge2AI #Innovation #ethicalAI
Are you interested in using #genomic and #phenotypic data for #pediatric research? The #FundingOpportunity from the Gabriella Miller #KidsFirst program co-led by #NIHCommonFund, @theNCI, & @NICHD_NIH opens Jan 16th, 2025: go.nih.gov/oDE9bWv
#BirthDefects #ChildhoodCancers
Just a few days left to register for the #NuclearArchitecture Meeting hosted by #4DNucleome! Join us in San Diego, CA on December 11-13, 2024. The deadline to register is Monday, December 2nd. Register today! bit.ly/3X9gha0
#NutritionforPrecisionHealth is advancing precision #nutrition and was featured on @CBSSunday! The study is led by a coalition of NIH partners, including #NIHCommonFund, the Office of Nutrition Research, and @AllofUsResearch. Enrollment is open! Watch here allof-us.org/3UY1zkm
The 2025 Consortium Undergraduate Student Program (CUSP) is recruiting! Join us for summer internships focused on senescence study in a variety of research sites across the U.S.
More info and application at: sennetconsortium.org/internship/
Do you develop and market scientific tools? Join us tomorrow, November 22nd from 1-2 PM ET to learn various strategies from #COMPA and @MetaCell during our #CFDEPublicWebinarSeries. Register here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @NIH_CommonFund
The @CfdeWorkbench team will showcase the #CFDE information portal (cfde.info), the #CFDE data portal (data.cfde.cloud), and #GeneSetCart (genesetcart.cfde.cloud) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC https://t.co/tgdMOPiAb6
It's almost time for #ASHG2024! Reminder, we have limited availability for exclusive 1:1 sessions at the #CFDE booth, grab yours before it's too late here: forms.gle/ioovRvfx3NA7SG…. Save travels and see you at Booth 571! @CfdeWorkbench @NIH_CommonFund
Mark your calendars because we are ONE WEEK away from our #ASHG2024 Ancillary Session on the #CFDE! We look forward to seeing you all in Denver! @CfdeWorkbench @NIH_CommonFund @motrpac
We are representing the Common Fund Data Ecosystem & debuting our #KnowledgeCenter Resource a #ASHG2024. Come by whenever (sign up below) to learn about how these 14 DCCs & 5 centers within the CFDE can be useful to you as a human geneticist @NIH_CommonFund @CfdeWorkbench
Join us in two weeks ✌️ at our #ASHG2024 ancillary session: A Human Geneticists' Guide to the Common Fund Data Ecosystem! Hear perspectives by the @NIH_CommonFund, us at the KC, @CfdeWorkbench, @motrpac and @GTExPortal. Hope to see you there!
Join us this Friday for the #CFDEPublicWebinarSeries featuring #MoTrPAC. Dr. Matthew Wheeler, Jimmy Zhen, & David Jimenez-Morales will present on the Data Hub, general MoTrPAC updates, upcoming data releases, and their pipelines/database structure #CFDE @CfdeWorkbench
Welcome to the ecosystem! The #KC is eager to work with the new #TrainingCenter & #CloudComputing teams @CfdeWorkbench @NIH_CommonFund
The Common Fund Data Ecosystem is hitting Denver this year, #ASHG2024. Visit our exhibition booth & learn about how the CFDE can support your research @CfdeWorkbench @NIH_CommonFund.
The NIH Common Fund #Complement_ARIE program needs your help to build a new Data Hub and Coordinating Center for the #NewApproachMethodologies Common Fund program! Explore the Notice of Intent to Publish a #FundingOpportunity at go.nih.gov/K6kfgdb
We're ONE day away from the next session of the #CFDEPublicWebinarSeries featuring Keyang Yu from
@exRNA @NIH_CommonFund! Details on joining can be found here: hugeamp.org/research.html?……
@CfdeWorkbench #NIHCommonFund #exRNA
📢 Calling all researchers! The #dkNET Pilot #Funding Program invites multi-disciplinary teams to develop #AI foundation models for #Type2Diabetes.
LOI Due: Oct 11, 2024
Application Due: Nov 12, 2024
Don’t miss out on this chance! Apply Now: dknet.org/about/ai-pilot
Learn how @WVCTSI will bring clinical research opportunities to rural communities in West Virginia as one of three new national hubs of the #CAREforHealth network: wvctsi.org/news/story?hea…
Join #NIH_CFDE on 8/30 at 1PM ET for an introduction webinar for Acute to #ChronicPain Signatures (@a2cps_pain). #A2CPS is an initiative to identify #biomarkers in pain science. Learn more: bit.ly/3vX6iJK
Learn how our @somaticediting researchers & their colleagues engineered an adeno-associated virus (#AAV) that safely crosses the #BloodBrainBarrier, which can help prevent, treat, and cure brain disorders caused by genetic changes. @NIMHgov nimh.nih.gov/news/science-n…
Attending the #HealthITSummit24? Join Dr. Chris Kinsinger, #NIHCommonFund, on 9/19 for a panel discussion on #AI Adoption in the Health Care Ecosystem. #ArtificialIntelligence #Bridge2AI
Check out this year's winners of the #NIH_SPARC codeathon, who made new #FAIRdata visualization platforms, analysis pipelines, and #AI tools to enhance use of SPARC #neuromodulation data. Learn more about the projects: bit.ly/3AEai3K