Discover, Analyze, and Integrate NIH Common Fund Data

The NIH Common Fund programs generate diverse datasets from a variety of projects ranging from genomics to phenotypes. The Common Fund Data Ecosystem (CFDE) aims to facilitate improved discovery, reuse, integration, and analyses of these datasets to form novel hypothesis for accelerating discoveries in biomedical research.

The Common Fund Data Ecosystem (CFDE) aims to enable broad use of data generated by Common Fund Programs to accelerate hypothesis generation and discovery.

TRAINING & OUTREACH
Independent Study in Biomedical Data Science, CFDE edition (ISBDS-CFDE)

The CFDE Edition of ISBDS is an NIH CFDE sponsored training course, focused on effective use and integration of Common Fund (CF) datasets for biomedical discovery.

Starts: June 3, 2024

Common Fund programs partnered with the CFDE

The NIH Common Fund is a funding entity within the NIH that supports bold scientific programs that catalyze discovery across all biomedical and behavioral research.

a1289ebb-0306-59a1-b0fc-e4d03a4790d7
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Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal

Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal
fair

Making data more FAIR

The Data Resource and Knowledge Centers are dedicated to enhancing the accessibility and utility of Common Fund-generated data and resources, striving to uphold the FAIR principles. This commitment serves as a catalyst for groundbreaking biomedical discoveries, fostering synergies across the diverse datasets within the Common Fund ecosystem, thereby unlocking novel avenues of research and innovation.
  • Findable
  • Accessible
  • Interoperable
  • Reusable

Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

Check out the newest installment of the SenNet Interview Series, featuring @nneretti and @Vidyani8 discussing their paper "SenNet recommendations for detecting senescent cells in different tissues" published with @SpringerNature in @NatRevMCB youtube.com/watch?v=Fx68AE…
2
#ICYMI! Read about the updated #NIH_CFDE #data portal which allows users to query multiple #NIHCommonFund #biomedical #datasets. Check it out today: go.nih.gov/rxSfJj2
2
Join us July 26th from 1-2 PM ET for the #CFDEPublicWebinarSeries, featuring "A Tour of the Human Reference Atlas v2.1" presented by Katy Börner and Bruce Herr from @_hubmap @sennetresearch! Register for the event here: broadinstitute.zoom.us/webinar/regist…
1
Hear science leaders from diverse backgrounds discuss #accessibility, #inclusivity & #CulturallyRelevant data to shape outreach & training for the #biomedical & #BehavioralScience research community! Register for the #CommunityEngagementWorkshop 7/24-25: bit.ly/3RPLATR
0
❗️In two hours❗️ July 15 (Monday): 2:00-3:00 PM ET Webinar: NINDS Neural Exposome Top Priorities (NEXT) Working Group Strategic Planning Open Session 🔗 Follow this link for more details and registration: bit.ly/4cDoV5x
1
Join #Bridge2AI tomorrow (7/16) at 3PM ET for a lecture on Policy and #Ethics in Innovation. Zoom link: bit.ly/3zfiAyn #AI #ML #ArtificialIntelligence #MachineLearning
2
Check out the most recent UDN publication! Key takeaway: A sibling pair had compound heterozygous VUS in the #TTNgene. Further reanalysis of RNAseq data with a different approach led to the diagnosis of congenital titinopathy. pubmed.ncbi.nlm.nih.gov/38924341/
5
The 2024 SPARC FAIR Codeathon is next month. Check out the winners of last year’s Codeathon here: bit.ly/4cCZ0ee Apply to join a team by July 27th to participate this year. #OpenScience #NIH_SPARC #codeathon
2
🧪 The deadline is tomorrow to respond to the Notice of Special Interest (NOSI) on advancing data science approaches for COVID-19 testing technologies! Explore existing data in RADx DataHub by July 16th, 2024. #COVID19 #DataScience Respond here: bit.ly/4a4oFf3
5
Dive into the effects of processed and unprocessed foods with us. Learn more: NIH Clinical Center Office of Patient Recruitment at 866-444-1134. Refer to study #22-DK-0002 go.usa.gov/xJxDr #clinicalresearch
8
First “Spatial Omics” conference organized by a major academic/professional society! 🤩🤩 Terrific line up and beautiful place in Rome. Can’t wait to catch up with many friends there 🤗🤗🤗 @EMBO⁩ ⁦@embl#spatialomics meetings.embo.org/event/24-spati…
181
Calling all neuromodulation researchers & clinicians! The #NANS25 Call for Abstracts is open. Submit your research by August 15th, 1 PM CT for a chance to present at the premier neuromodulation conference. Don't miss out! bit.ly/4eXLZxp #neuroscience #NIH_SPARC @NANS_ION
3
Think you know the ins & outs of your innards? Try your luck on these 3D organ renderings from the #GuesstheOrgan contest run by the Human Reference Atlas (#HRA). You could win HRA swag! See if you are in sync with your inner workings!
1
Rene gave a hands-on workshop on GlycoBioInformatics tools at the University of Mississippi introducing tool and databases, such as GlyGen, GRITS Toolbox, and GlyTouCan.
8
The #NIHCommonFund will host a #CommunityEngagementWorkshop to share ideas about how to make #research #data more #Accessible, #Inclusive or #CulturallyRelevant. Tune in to one of our breakout sessions and join the conversation 7/24-25. bit.ly/3RPLATR
1
DYK #GeneEditing could reverse hearing loss? Learn how our @somaticediting #SCGE researchers and their colleagues restored hearing in adult mice with a rare form of genetic deafness commonfund.nih.gov/editing/highli…
3
Have you heard the news? The #NIHCommonFund issued a request to gather input about scientific opportunities and research challenges that may shape future activities! Submit your #innovative ideas in #Biomedical or #BehavioralResearch here: youtube.com/watch?v=SAi24Z…
2
Are you interested in coding and winning cash prizes? The 2024 SPARC FAIR Codeathon is forming teams now! Don't miss your chance to win up to $50,000. The deadline to join a team is July 27th. Learn more and sign up today: bit.ly/436EHlt #NIH_SPARC #opendata #codeathon
0
Do you use #biomedical #datasets in your research? Read about the new #DataPortal from #NIH_CFDE! This portal allows users to query #NIHCommonFund #data sets. It also provides access to trainings and other resources. Check it out today: go.nih.gov/rxSfJj2
0
The SPARC repository was developed to curate and publish high-quality datasets related to the autonomic nervous system. Now, all peripheral nervous system data can be hosted. Learn more and contribute your data on the SPARC Portal. sparc.science #OpenScience #NIH_SPARC
3
Today, Rene is presenting GlyGen at the 2024 Mid-South Glycoscience Meeting (University of Mississippi) pharm.olemiss.edu/glycore/2024-m…
2
🧩✨ Contest Time! Can you guess the organ? 🧠👀 Drop your guess in the comments and retweet! 📝 All correct answers enter a prize raffle! New challenge every Tuesday (starting today) through mid-August! 🏆 #HRA #GuessTheOrgan @AndreasBueckle
5
Tune in next week (7/16 at 3PM ET) for this #Bridge2AI lecture on Policy and #Ethics in #Innovation. Learn how to develop and apply ethics and #equity principles to engagement tools in #AI & #ML. bit.ly/3zfiAyn
0
NANS 2025 Call for Abstracts is Now Open! The submission deadline is Thursday, August 15, 2024 at 1 PM Central Time. Join SPARC at #NANS25. bit.ly/4eXLZxp #NIH_SPARC #OpenScience @NANS_ION
2
Mark your calendars for this upcoming lecture on 7/29 at 1:30 PM ET featuring #Bridge2AI Investigator Dr. Aaron Lee as he talks about leveraging #AI for #diabetes. Learn more: go.nih.gov/1WHVJ3f
0
The #NIHCommonFund is hosting a #DataEngagementWorkshop to share ideas to improve #data #accessibility and #inclusivity in the #Biomedical & #BehavioralResearch community! Join the virtual interactive discussion 7/24-7/25: bit.ly/3RPLATR
6
Our @somaticediting #SCGE researchers engineered an adeno-associated virus (#AAV) that safely crosses the blood-brain barrier and delivers a set of molecular tools that can turn off the gene that causes prion diseases broadinstitute.org/news/therapy-c…
3
#NIHCommonFund programs span the entire continuum of #Biomedical and #BehavioralResearch, including those aimed at enhancing the #BiomedicalWorkforce. We’re looking for #innovative ideas to shape future Common Fund activities! Respond by 8/10/2024: go.nih.gov/OH5JNsP
3
Great opportunity! There's a new chance for ACTIVE grants to add on a supplement. Check out the details here: bit.ly/4eQGUXK Need assistance with your Material and Data Sharing Plan? Reach out to us—we're here to help! #ResearchFunding #OpenData #NIH_SPARC
1
Make your voice heard with this @NIH @NIHendaddiction #RFI as they set #painresearch priorities for the coming years a2cps.org/news/latest/
0
Interested in conducting #CommunityEngaged Research? Attend the Ensuring Ethical Research in Our Communities by the Community Engagement Alliance Consultative Resource #CEACR & Community Partnerships to Advance Science for Society #ComPASS 7/10 at 1 PM ET us06web.zoom.us/webinar/regist…
0
Ever feel a glitch in your extracellular matrix? This image from #_hubmap researcher Dr. Dharma Pally @NabaLabUIC shows molecules in cells that make up the cytoskeleton & bring structure to your internal reality. Now, pull your cellf together! 📷 #matrixiseverywhere
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Save the date for this virtual discussion on emerging #ESLI topics. Join #Bridge2AI on 7/16 at 3PM ET to learn how to apply #ethics and #equity principles to engagement tools in #AI and #ML. bit.ly/3zfiAyn
0
We want to hear your ideas to advance cutting-edge #research methodologies, address critical gaps in knowledge and enhance new #technology! Be a part of shaping potential new #NIHCommonFund activities. Responses due 8/10. go.nih.gov/OH5JNsP
8
Learn how our @somaticediting #SCGE researchers and their colleagues developed an #epigenetic technology that can be safely and efficiently delivered to the brain to potentially treat #prion diseases. broadinstitute.org/news/therapy-c…
3
#ICYMI Registration is still open for the Nuclear Architecture Meeting hosted by #4DNucleome to be held in San Diego, CA Dec 11-13, 2024. The deadline to submit an abstract for a talk or poster is Oct 4. Trainees, students, and postdocs encouraged to apply bit.ly/3X9gha0
4
Registration is still open for the #glycotime online seminar and workshop on “Exploring Glycan and Protein Function in GlyGen” on July 5th at 11am ET.
11
Calling all spatial biology & pathology experts. Join us at the 2024 From Atlas to Practice Innovation Lab to revolutionize disease diagnosis & treatment. Apply by June 30. bit.ly/3XIt3Nd #spatialbiology #pathology #innovation @_hubmap
1
Early bird registration for INCF 2024 closes today! Register now for a discount. #NIH_SPARC #OpenScience bit.ly/4dLheLI
2
Attending #Nutrition2024 in Chicago? Check out Booth 10 June 29-July 2 to learn about our #NutritionforPrecisionHealth study! We are developing algorithms to predict individual responses to diets and nutrients. Learn more about the study here: nutritionforprecisionhealth.org
6
Mark your calendars! The #NIHCommonFund is hosting a 1.5-day workshop on 7/24-7/25 to hear from the community about how to make our #biomedical #data resources more #inclusive. Register for this event on now. bit.ly/3RPLATR
4
Come and join us. Starting soon.
0
Join our #NutritionforPrecisionHealth program at the #Nutrition2024 conference in Chicago from 3pm–4:30pm CT on Saturday, June 29 for a session on methods used in the study to assess #diet, the #microbiome, and #metabolomics. View the schedule: nutrition2024.eventscribe.net/agenda.asp?pfp…
3
Interested in shaping the future of #Biomedical and #BehavioralResearch? The #NIHCommonFund wants to hear from you! We are looking ideas for resources, tools, or knowledge to address important challenges or opportunities. Responses are due 8/10. go.nih.gov/OH5JNsP
3
Can you #code? 2024 SPARC FAIR #Codeathon Teams are being formed! Don't miss out on up to US$50K cash & prizes. Join a team today—deadline 7/27 for the in-the-cloud Codeathon 8/10 to 8/12. bit.ly/436EHlt #NIH_SPARC #opendata
1
DYK there are no treatments for #prion diseases - #neurodegenerative diseases caused by unfolded proteins? Researchers, including @somaticediting #SCGE investigators, developed a system to silence the gene responsible for prion diseases in the brain: broadinstitute.org/news/therapy-c…
0
Want to reuse spatial omics and #SingleCell sequence data to advance the field of #SpatialBbiology? Submit a short project pitch to be selected for @NCIHTAN Data Jamboree on the NIH campus in Bethesda, MD, November 6-8, 2024 by Friday, July 12, 2024! humantumoratlas.org/jamboree
1
Interested in #proteins and understudied areas of #biology that have a high impact on human health? Tune in this Fri (6/28) at 1PM ET to learn more about the Illuminating the #DruggableGenome (#IDG) project. Register: bit.ly/3KZwBmA. #NIH_CFDE
3
Have ideas about critical challenges or exciting emerging opportunities in #Biomedical or #BehavioralResearch? The #NIHCommonFund wants to hear these ideas that may shape future Common Fund activities. Responses are due 8/10. go.nih.gov/OH5JNsP
0
Don't forget to join @Bridge2aiVoice tomorrow (6/26) at 3PM ET to learn more about #DigitalHealth Leadership and #Clinical #ArtificialIntelligence (#AI). Log into MS Teams: bit.ly/3z0CBbW. ID: 210089898487. Passcode: EriipF #Bridge2AI
2
Join us on this Friday (6/28) at 1 pm ET for an overview presentation on IDG at the CFDE Webinar Series. Register at this link: hugeamp.org/research.html?…
0
Want to build #bioinformatics workflows with ease? Learn about the Playbook Workflow Builder & how to create workflows in this virtual workshop on 6/25 at 1PM ET. Learn more: bit.ly/4blDfy6 #DataScience #Biomedicine #DataEcosystem
6
The #NIHHighRisk research program is holding pre-application webinars this week. Tune in if you're a scientist at any career stage with ideas for highly #innovative biomedical, behavioral, or social science research. Learn more: commonfund.nih.gov/highrisk
0
The #NIH_SPARC Data and Resource Center May Office Hours for K-core #curation, MAP-core, SIM-core and DAT-core can be found here: bit.ly/DRCOfficeHours We love questions! We have answers. #computationalmodeling #data #openscience https://t.co/Ow87wVZi4W
3
Want to dig into the marrow of this @CellCellPress article? This News Release from @PennMedicine about #_hubmap researcher Dr. Kai Tan’s atlas of bone marrow cells really gets to the meat of the issue! @KaiTanLab1
1
🏆 Kimberly LeBlanc, MS, CGC Named Recipient of the Harvard Medical School 2024 Joseph B. Martin Dean's Leadership Award for the Advancement of Women Staff! Congratulations Kim!
4
Playbook Workflow Builder: Interactive Construction of Bioinformatics Workflows from a Network of Microservices biorxiv.org/content/10.110…
3
Join us on Tuesday, June 25th at 1:00 PM ET for a virtual workshop introducing the Playbook Workflow Builder: playbook-workflow-builder.cloud, a new #bioinformatics platform to interactively create #workflows with no coding skills. Registration: mssm.zoom.us/webinar/regist… #genomics #omics
4
Please help our friends at @NIH_CommonFund by weighing in on your research needs and ideas!
1
The @NIH has issued a request to gather input about scientific opportunities and research challenges that may shape future #CommonFund activities! Submit your innovative ideas in #biomedical or #BehavioralResearch here: go.nih.gov/OH5JNsP
5
Rare Disease Day at @NIH 2024 has passed, but our commitment to the #RareDiseases community continues. Read the @NIHRecord feature story showcasing patients’ & caregivers’ voices, meaningful scientific discoveries, new opportunities, and more: go.nih.gov/aNzY4FN #RDDNIH
10
m#NIHHighRisk researchers have discovered new ways that our #kidneys sense and response to levels of #potassium in the blood. Learn more in the new @NatureComms article: nature.com/articles/s4146…
1
🗣️ Calling all Researchers, we need your input! Participate in our survey before June 21 to help prepare for NIDDK's AI in Precision Medicine workshops. Your expertise is invaluable! Link: forms.gle/dn9F46dWGftWvZ… 🔬 #DiabetesResearch #AI #PrecisionMedicine #NIDDK #AI #ML
5
It's Day 3 and we're featuring @pdtr124's image! He was inspired by cell alignment using the cytoskeleton as a proxy with respect to SNED1 fibers in the ECM. Looks like an exciting imaging for an exciting talk! #MatrixisEverywhere
12
A great talk by @AviMaayan and his team on Tuesday at the @SinaiGenetics WIP in Computational Biology and Data Science, showcasing their excellent new bioinformatic interfaces, including Rummagene and others.
12
Are you ready to unlock the full potential of big data in pediatric research at no charge to you? Join the Kids First CFDE Pediatric PowerUp for an immersive learning experience. Let's drive progress together: buff.ly/4cnD1az #KidsFirst #CFDE #BigData #ResearchInnovation
2
Applying for an @NIH grant this summer? ☀ Here are some key resources to keep handy! 📝 Explore more: grants.nih.gov/grants/how-to-… #NIHgrants
27
Join us in the effort against childhood cancer and congenital disorders! Partner with #KidsFirstDRC to collaborate with nationally known organizations dedicated to research and support. Visit buff.ly/3xiQz8z to learn more. #KidsFirstPartners
3
#KidsFirst virtual office hours are now held in collaboration with @velseraofficial and the #INCLUDEDCC. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: buff.ly/3qxhLwy @NIH_CommonFund
1
Want to bypass the traditional postdoctoral period and launch your research career? Learn about the #NIHHighRisk Early Independence Award at its upcoming pre-application webinar on June 26 at 1 PM EDT. More detail: grants.nih.gov/grants/guide/r…
1
Participant 225: female, age 5, with developmental delay, immunodeficiency, and skin changes and variants in #RIPK1. Reach out if you know of others with similar symptoms and variants! undiagnosed.hms.harvard.edu/participants/p…
0
Are you ready to unlock the full potential of big data in pediatric research at no charge to you? Join the Kids First CFDE Pediatric PowerUp for an immersive learning experience. Let's drive progress together: buff.ly/4cnD1az #KidsFirst #CFDE #BigData #ResearchInnovation
0
Join us for our 3rd Annual Spatial Biology Summit this September at Stanford! Register by 7/12 for the early bird registration fee. We have an EXCELLENT lineup of speakers covering the spatial biology spectrum. More info here: angelolab.com/spatial-biolog… @MikeAngeloLab @Bendall_Lab
20
Want to learn more about #DigitalHealth Leadership and #Clinical #ArtificialIntelligence (#AI)? Tune in for this @Bridge2aiVoice (#Bridge2AI) webinar on 6/26 at 3PM ET. Log into MS Teams: bit.ly/3z0CBbW. ID: 210089898487. Passcode: EriipF.
2
The #NIHHighRisk Transformative Research Award supports bold, groundbreaking #biomedical and #behavioral research projects. Learn more at the pre-application webinar on June 26 from 3:30-5:00 PM EDT. More detail in the funding announcement: grants.nih.gov/grants/guide/r…
2
Professor Peter John Hunter, founder of the Auckland Bioengineering Institute and a key member of the SPARC community, to be appointed a Knight Companion of the New Zealand Order of Merit for services to medical science. bit.ly/4bZU56K #NIH_SPARC @ABI_bioeng #OpenScience
1
Explore The SPARC Portal's latest enhancements, such as new landing pages for consortia supported by the portal and a new request access button for users to access complete datasets from previous versions. bit.ly/3tNVXi7 #NIH_SPARC #OpenScience #updates
0
Are you interested in #genomics research? Join #SMaHTnetwork researcher Fritz Sedlazeck and colleagues for a seminar titled "Learning about Long Read Sequencing Utility and Applications" from 10am-12:30pm CDT on Friday, June 21. Register here: hgsc.bcm.edu/LongReadSeminar
2
Are you interested in brain research? Check out this article by our #NIHHighRisk Research Program #NewInnovator awardee Jerzy Szablowski and colleagues who developed an approach to monitor brain gene activity using markers in the blood. Read more: commonfund.nih.gov/highrisk/highl…
3
Don't forget to join the #Bridge2AI AI READI team tomorrow (6/18) at 3PM for a webinar on the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom: bit.ly/4arolWV
0
Don't miss your chance to learn more about #BigData analysis! Register today for these upcoming #DataScience online courses with @kidsfirstDRC: buff.ly/3VE1d32
0
The GlyGen annual meeting last week was successful. We got a lot good feedback and suggestions from advisors and guests. In addition we had 1.5 days for our developer meeting to plan next releases and improve collaboration. Also ... glycan.
10
Project Pitch is closing tomorrow for the 2024 SPARC FAIR Codeathon. Show off your coding skills in this 3-day virtual challenge. It's free to enter, & there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
0
A SPARC-funded team of researchers and engineers has created a groundbreaking modular implantable device. In the spirit of #openscience, they're making the work open source. Learn more about this exciting news on the SPARC Portal: bit.ly/3xq26Tt #medtech #neuromodulation
2
Level up your research game this summer with the Kids First CFDE Pediatric PowerUp! In just 2 hours a day over 5 days, you'll master the Kids First Data Portal, unlock the power of CAVATICA, and become a champion analyst. Sign up here: buff.ly/4cnD1az #KidsFirstDRC
2
Congratulations to the Acute to Chronic @a2cps_pain program for winning a Golden Neuron Award for ensuring the voices of people with #LivedExperience were incorporated into the study! Read more about this amazing accomplishment below! go.nih.gov/39fMFiT
4
Join us for the 2nd installment of our new webinar series featuring resources & tools within the #NIH_CFDE @CFDEKC @AviMaayan @CfdeWorkbench @LINCSProgram
8
On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO rummageo.com register: cfde.info
20
Unlocking the mysteries of childhood diseases by studying #ChildhoodCancer and #CongenitalDisorders together, #KidsFirstDRC and #KidsFirst researchers find common threads in the body's code. Together, we can fight for healthier futures.
2
Join #KidsFirst and @kidsfirstDRC on May 29 from 11 AM-12PM ET for a transformative look into #pediatric research at the Spring Webinar, “Big Data Dialogue, The Next Catalyst for Cures.” Live demos & insightful discussions await. Register: nih.zoomgov.com/meeting/regist… #TogetherWeRise
1

Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

Check out the newest installment of the SenNet Interview Series, featuring @nneretti and @Vidyani8 discussing their paper "SenNet recommendations for detecting senescent cells in different tissues" published with @SpringerNature in @NatRevMCB youtube.com/watch?v=Fx68AE…
2
#ICYMI! Read about the updated #NIH_CFDE #data portal which allows users to query multiple #NIHCommonFund #biomedical #datasets. Check it out today: go.nih.gov/rxSfJj2
2
Join us July 26th from 1-2 PM ET for the #CFDEPublicWebinarSeries, featuring "A Tour of the Human Reference Atlas v2.1" presented by Katy Börner and Bruce Herr from @_hubmap @sennetresearch! Register for the event here: broadinstitute.zoom.us/webinar/regist…
1
Hear science leaders from diverse backgrounds discuss #accessibility, #inclusivity & #CulturallyRelevant data to shape outreach & training for the #biomedical & #BehavioralScience research community! Register for the #CommunityEngagementWorkshop 7/24-25: bit.ly/3RPLATR
0
❗️In two hours❗️ July 15 (Monday): 2:00-3:00 PM ET Webinar: NINDS Neural Exposome Top Priorities (NEXT) Working Group Strategic Planning Open Session 🔗 Follow this link for more details and registration: bit.ly/4cDoV5x
1
Join #Bridge2AI tomorrow (7/16) at 3PM ET for a lecture on Policy and #Ethics in Innovation. Zoom link: bit.ly/3zfiAyn #AI #ML #ArtificialIntelligence #MachineLearning
2
Check out the most recent UDN publication! Key takeaway: A sibling pair had compound heterozygous VUS in the #TTNgene. Further reanalysis of RNAseq data with a different approach led to the diagnosis of congenital titinopathy. pubmed.ncbi.nlm.nih.gov/38924341/
5
The 2024 SPARC FAIR Codeathon is next month. Check out the winners of last year’s Codeathon here: bit.ly/4cCZ0ee Apply to join a team by July 27th to participate this year. #OpenScience #NIH_SPARC #codeathon
2
🧪 The deadline is tomorrow to respond to the Notice of Special Interest (NOSI) on advancing data science approaches for COVID-19 testing technologies! Explore existing data in RADx DataHub by July 16th, 2024. #COVID19 #DataScience Respond here: bit.ly/4a4oFf3
5
Dive into the effects of processed and unprocessed foods with us. Learn more: NIH Clinical Center Office of Patient Recruitment at 866-444-1134. Refer to study #22-DK-0002 go.usa.gov/xJxDr #clinicalresearch
8
First “Spatial Omics” conference organized by a major academic/professional society! 🤩🤩 Terrific line up and beautiful place in Rome. Can’t wait to catch up with many friends there 🤗🤗🤗 @EMBO⁩ ⁦@embl#spatialomics meetings.embo.org/event/24-spati…
181
Calling all neuromodulation researchers & clinicians! The #NANS25 Call for Abstracts is open. Submit your research by August 15th, 1 PM CT for a chance to present at the premier neuromodulation conference. Don't miss out! bit.ly/4eXLZxp #neuroscience #NIH_SPARC @NANS_ION
3
Think you know the ins & outs of your innards? Try your luck on these 3D organ renderings from the #GuesstheOrgan contest run by the Human Reference Atlas (#HRA). You could win HRA swag! See if you are in sync with your inner workings!
1
Rene gave a hands-on workshop on GlycoBioInformatics tools at the University of Mississippi introducing tool and databases, such as GlyGen, GRITS Toolbox, and GlyTouCan.
8
The #NIHCommonFund will host a #CommunityEngagementWorkshop to share ideas about how to make #research #data more #Accessible, #Inclusive or #CulturallyRelevant. Tune in to one of our breakout sessions and join the conversation 7/24-25. bit.ly/3RPLATR
1
DYK #GeneEditing could reverse hearing loss? Learn how our @somaticediting #SCGE researchers and their colleagues restored hearing in adult mice with a rare form of genetic deafness commonfund.nih.gov/editing/highli…
3
Have you heard the news? The #NIHCommonFund issued a request to gather input about scientific opportunities and research challenges that may shape future activities! Submit your #innovative ideas in #Biomedical or #BehavioralResearch here: youtube.com/watch?v=SAi24Z…
2
Are you interested in coding and winning cash prizes? The 2024 SPARC FAIR Codeathon is forming teams now! Don't miss your chance to win up to $50,000. The deadline to join a team is July 27th. Learn more and sign up today: bit.ly/436EHlt #NIH_SPARC #opendata #codeathon
0
Do you use #biomedical #datasets in your research? Read about the new #DataPortal from #NIH_CFDE! This portal allows users to query #NIHCommonFund #data sets. It also provides access to trainings and other resources. Check it out today: go.nih.gov/rxSfJj2
0
The SPARC repository was developed to curate and publish high-quality datasets related to the autonomic nervous system. Now, all peripheral nervous system data can be hosted. Learn more and contribute your data on the SPARC Portal. sparc.science #OpenScience #NIH_SPARC
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Today, Rene is presenting GlyGen at the 2024 Mid-South Glycoscience Meeting (University of Mississippi) pharm.olemiss.edu/glycore/2024-m…
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🧩✨ Contest Time! Can you guess the organ? 🧠👀 Drop your guess in the comments and retweet! 📝 All correct answers enter a prize raffle! New challenge every Tuesday (starting today) through mid-August! 🏆 #HRA #GuessTheOrgan @AndreasBueckle
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Tune in next week (7/16 at 3PM ET) for this #Bridge2AI lecture on Policy and #Ethics in #Innovation. Learn how to develop and apply ethics and #equity principles to engagement tools in #AI & #ML. bit.ly/3zfiAyn
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NANS 2025 Call for Abstracts is Now Open! The submission deadline is Thursday, August 15, 2024 at 1 PM Central Time. Join SPARC at #NANS25. bit.ly/4eXLZxp #NIH_SPARC #OpenScience @NANS_ION
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Mark your calendars for this upcoming lecture on 7/29 at 1:30 PM ET featuring #Bridge2AI Investigator Dr. Aaron Lee as he talks about leveraging #AI for #diabetes. Learn more: go.nih.gov/1WHVJ3f
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The #NIHCommonFund is hosting a #DataEngagementWorkshop to share ideas to improve #data #accessibility and #inclusivity in the #Biomedical & #BehavioralResearch community! Join the virtual interactive discussion 7/24-7/25: bit.ly/3RPLATR
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Our @somaticediting #SCGE researchers engineered an adeno-associated virus (#AAV) that safely crosses the blood-brain barrier and delivers a set of molecular tools that can turn off the gene that causes prion diseases broadinstitute.org/news/therapy-c…
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#NIHCommonFund programs span the entire continuum of #Biomedical and #BehavioralResearch, including those aimed at enhancing the #BiomedicalWorkforce. We’re looking for #innovative ideas to shape future Common Fund activities! Respond by 8/10/2024: go.nih.gov/OH5JNsP
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Great opportunity! There's a new chance for ACTIVE grants to add on a supplement. Check out the details here: bit.ly/4eQGUXK Need assistance with your Material and Data Sharing Plan? Reach out to us—we're here to help! #ResearchFunding #OpenData #NIH_SPARC
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Make your voice heard with this @NIH @NIHendaddiction #RFI as they set #painresearch priorities for the coming years a2cps.org/news/latest/
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Interested in conducting #CommunityEngaged Research? Attend the Ensuring Ethical Research in Our Communities by the Community Engagement Alliance Consultative Resource #CEACR & Community Partnerships to Advance Science for Society #ComPASS 7/10 at 1 PM ET us06web.zoom.us/webinar/regist…
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Ever feel a glitch in your extracellular matrix? This image from #_hubmap researcher Dr. Dharma Pally @NabaLabUIC shows molecules in cells that make up the cytoskeleton & bring structure to your internal reality. Now, pull your cellf together! 📷 #matrixiseverywhere
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Save the date for this virtual discussion on emerging #ESLI topics. Join #Bridge2AI on 7/16 at 3PM ET to learn how to apply #ethics and #equity principles to engagement tools in #AI and #ML. bit.ly/3zfiAyn
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We want to hear your ideas to advance cutting-edge #research methodologies, address critical gaps in knowledge and enhance new #technology! Be a part of shaping potential new #NIHCommonFund activities. Responses due 8/10. go.nih.gov/OH5JNsP
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Learn how our @somaticediting #SCGE researchers and their colleagues developed an #epigenetic technology that can be safely and efficiently delivered to the brain to potentially treat #prion diseases. broadinstitute.org/news/therapy-c…
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#ICYMI Registration is still open for the Nuclear Architecture Meeting hosted by #4DNucleome to be held in San Diego, CA Dec 11-13, 2024. The deadline to submit an abstract for a talk or poster is Oct 4. Trainees, students, and postdocs encouraged to apply bit.ly/3X9gha0
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Registration is still open for the #glycotime online seminar and workshop on “Exploring Glycan and Protein Function in GlyGen” on July 5th at 11am ET.
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Calling all spatial biology & pathology experts. Join us at the 2024 From Atlas to Practice Innovation Lab to revolutionize disease diagnosis & treatment. Apply by June 30. bit.ly/3XIt3Nd #spatialbiology #pathology #innovation @_hubmap
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Early bird registration for INCF 2024 closes today! Register now for a discount. #NIH_SPARC #OpenScience bit.ly/4dLheLI
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Attending #Nutrition2024 in Chicago? Check out Booth 10 June 29-July 2 to learn about our #NutritionforPrecisionHealth study! We are developing algorithms to predict individual responses to diets and nutrients. Learn more about the study here: nutritionforprecisionhealth.org
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Mark your calendars! The #NIHCommonFund is hosting a 1.5-day workshop on 7/24-7/25 to hear from the community about how to make our #biomedical #data resources more #inclusive. Register for this event on now. bit.ly/3RPLATR
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Come and join us. Starting soon.
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Join our #NutritionforPrecisionHealth program at the #Nutrition2024 conference in Chicago from 3pm–4:30pm CT on Saturday, June 29 for a session on methods used in the study to assess #diet, the #microbiome, and #metabolomics. View the schedule: nutrition2024.eventscribe.net/agenda.asp?pfp…
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Interested in shaping the future of #Biomedical and #BehavioralResearch? The #NIHCommonFund wants to hear from you! We are looking ideas for resources, tools, or knowledge to address important challenges or opportunities. Responses are due 8/10. go.nih.gov/OH5JNsP
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Can you #code? 2024 SPARC FAIR #Codeathon Teams are being formed! Don't miss out on up to US$50K cash & prizes. Join a team today—deadline 7/27 for the in-the-cloud Codeathon 8/10 to 8/12. bit.ly/436EHlt #NIH_SPARC #opendata
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DYK there are no treatments for #prion diseases - #neurodegenerative diseases caused by unfolded proteins? Researchers, including @somaticediting #SCGE investigators, developed a system to silence the gene responsible for prion diseases in the brain: broadinstitute.org/news/therapy-c…
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Want to reuse spatial omics and #SingleCell sequence data to advance the field of #SpatialBbiology? Submit a short project pitch to be selected for @NCIHTAN Data Jamboree on the NIH campus in Bethesda, MD, November 6-8, 2024 by Friday, July 12, 2024! humantumoratlas.org/jamboree
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Interested in #proteins and understudied areas of #biology that have a high impact on human health? Tune in this Fri (6/28) at 1PM ET to learn more about the Illuminating the #DruggableGenome (#IDG) project. Register: bit.ly/3KZwBmA. #NIH_CFDE
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Have ideas about critical challenges or exciting emerging opportunities in #Biomedical or #BehavioralResearch? The #NIHCommonFund wants to hear these ideas that may shape future Common Fund activities. Responses are due 8/10. go.nih.gov/OH5JNsP
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Don't forget to join @Bridge2aiVoice tomorrow (6/26) at 3PM ET to learn more about #DigitalHealth Leadership and #Clinical #ArtificialIntelligence (#AI). Log into MS Teams: bit.ly/3z0CBbW. ID: 210089898487. Passcode: EriipF #Bridge2AI
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Join us on this Friday (6/28) at 1 pm ET for an overview presentation on IDG at the CFDE Webinar Series. Register at this link: hugeamp.org/research.html?…
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Want to build #bioinformatics workflows with ease? Learn about the Playbook Workflow Builder & how to create workflows in this virtual workshop on 6/25 at 1PM ET. Learn more: bit.ly/4blDfy6 #DataScience #Biomedicine #DataEcosystem
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The #NIHHighRisk research program is holding pre-application webinars this week. Tune in if you're a scientist at any career stage with ideas for highly #innovative biomedical, behavioral, or social science research. Learn more: commonfund.nih.gov/highrisk
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The #NIH_SPARC Data and Resource Center May Office Hours for K-core #curation, MAP-core, SIM-core and DAT-core can be found here: bit.ly/DRCOfficeHours We love questions! We have answers. #computationalmodeling #data #openscience https://t.co/Ow87wVZi4W
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Want to dig into the marrow of this @CellCellPress article? This News Release from @PennMedicine about #_hubmap researcher Dr. Kai Tan’s atlas of bone marrow cells really gets to the meat of the issue! @KaiTanLab1
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🏆 Kimberly LeBlanc, MS, CGC Named Recipient of the Harvard Medical School 2024 Joseph B. Martin Dean's Leadership Award for the Advancement of Women Staff! Congratulations Kim!
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Playbook Workflow Builder: Interactive Construction of Bioinformatics Workflows from a Network of Microservices biorxiv.org/content/10.110…
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Join us on Tuesday, June 25th at 1:00 PM ET for a virtual workshop introducing the Playbook Workflow Builder: playbook-workflow-builder.cloud, a new #bioinformatics platform to interactively create #workflows with no coding skills. Registration: mssm.zoom.us/webinar/regist… #genomics #omics
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Please help our friends at @NIH_CommonFund by weighing in on your research needs and ideas!
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The @NIH has issued a request to gather input about scientific opportunities and research challenges that may shape future #CommonFund activities! Submit your innovative ideas in #biomedical or #BehavioralResearch here: go.nih.gov/OH5JNsP
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Rare Disease Day at @NIH 2024 has passed, but our commitment to the #RareDiseases community continues. Read the @NIHRecord feature story showcasing patients’ & caregivers’ voices, meaningful scientific discoveries, new opportunities, and more: go.nih.gov/aNzY4FN #RDDNIH
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m#NIHHighRisk researchers have discovered new ways that our #kidneys sense and response to levels of #potassium in the blood. Learn more in the new @NatureComms article: nature.com/articles/s4146…
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🗣️ Calling all Researchers, we need your input! Participate in our survey before June 21 to help prepare for NIDDK's AI in Precision Medicine workshops. Your expertise is invaluable! Link: forms.gle/dn9F46dWGftWvZ… 🔬 #DiabetesResearch #AI #PrecisionMedicine #NIDDK #AI #ML
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It's Day 3 and we're featuring @pdtr124's image! He was inspired by cell alignment using the cytoskeleton as a proxy with respect to SNED1 fibers in the ECM. Looks like an exciting imaging for an exciting talk! #MatrixisEverywhere
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A great talk by @AviMaayan and his team on Tuesday at the @SinaiGenetics WIP in Computational Biology and Data Science, showcasing their excellent new bioinformatic interfaces, including Rummagene and others.
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Are you ready to unlock the full potential of big data in pediatric research at no charge to you? Join the Kids First CFDE Pediatric PowerUp for an immersive learning experience. Let's drive progress together: buff.ly/4cnD1az #KidsFirst #CFDE #BigData #ResearchInnovation
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Applying for an @NIH grant this summer? ☀ Here are some key resources to keep handy! 📝 Explore more: grants.nih.gov/grants/how-to-… #NIHgrants
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Join us in the effort against childhood cancer and congenital disorders! Partner with #KidsFirstDRC to collaborate with nationally known organizations dedicated to research and support. Visit buff.ly/3xiQz8z to learn more. #KidsFirstPartners
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#KidsFirst virtual office hours are now held in collaboration with @velseraofficial and the #INCLUDEDCC. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: buff.ly/3qxhLwy @NIH_CommonFund
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Want to bypass the traditional postdoctoral period and launch your research career? Learn about the #NIHHighRisk Early Independence Award at its upcoming pre-application webinar on June 26 at 1 PM EDT. More detail: grants.nih.gov/grants/guide/r…
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Participant 225: female, age 5, with developmental delay, immunodeficiency, and skin changes and variants in #RIPK1. Reach out if you know of others with similar symptoms and variants! undiagnosed.hms.harvard.edu/participants/p…
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Are you ready to unlock the full potential of big data in pediatric research at no charge to you? Join the Kids First CFDE Pediatric PowerUp for an immersive learning experience. Let's drive progress together: buff.ly/4cnD1az #KidsFirst #CFDE #BigData #ResearchInnovation
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Join us for our 3rd Annual Spatial Biology Summit this September at Stanford! Register by 7/12 for the early bird registration fee. We have an EXCELLENT lineup of speakers covering the spatial biology spectrum. More info here: angelolab.com/spatial-biolog… @MikeAngeloLab @Bendall_Lab
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Want to learn more about #DigitalHealth Leadership and #Clinical #ArtificialIntelligence (#AI)? Tune in for this @Bridge2aiVoice (#Bridge2AI) webinar on 6/26 at 3PM ET. Log into MS Teams: bit.ly/3z0CBbW. ID: 210089898487. Passcode: EriipF.
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The #NIHHighRisk Transformative Research Award supports bold, groundbreaking #biomedical and #behavioral research projects. Learn more at the pre-application webinar on June 26 from 3:30-5:00 PM EDT. More detail in the funding announcement: grants.nih.gov/grants/guide/r…
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Professor Peter John Hunter, founder of the Auckland Bioengineering Institute and a key member of the SPARC community, to be appointed a Knight Companion of the New Zealand Order of Merit for services to medical science. bit.ly/4bZU56K #NIH_SPARC @ABI_bioeng #OpenScience
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Explore The SPARC Portal's latest enhancements, such as new landing pages for consortia supported by the portal and a new request access button for users to access complete datasets from previous versions. bit.ly/3tNVXi7 #NIH_SPARC #OpenScience #updates
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Are you interested in #genomics research? Join #SMaHTnetwork researcher Fritz Sedlazeck and colleagues for a seminar titled "Learning about Long Read Sequencing Utility and Applications" from 10am-12:30pm CDT on Friday, June 21. Register here: hgsc.bcm.edu/LongReadSeminar
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Are you interested in brain research? Check out this article by our #NIHHighRisk Research Program #NewInnovator awardee Jerzy Szablowski and colleagues who developed an approach to monitor brain gene activity using markers in the blood. Read more: commonfund.nih.gov/highrisk/highl…
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Don't forget to join the #Bridge2AI AI READI team tomorrow (6/18) at 3PM for a webinar on the regulatory considerations of #HealthyEquity, #AI (#ML), and bias. Join by Zoom: bit.ly/4arolWV
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Don't miss your chance to learn more about #BigData analysis! Register today for these upcoming #DataScience online courses with @kidsfirstDRC: buff.ly/3VE1d32
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The GlyGen annual meeting last week was successful. We got a lot good feedback and suggestions from advisors and guests. In addition we had 1.5 days for our developer meeting to plan next releases and improve collaboration. Also ... glycan.
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Project Pitch is closing tomorrow for the 2024 SPARC FAIR Codeathon. Show off your coding skills in this 3-day virtual challenge. It's free to enter, & there's $50k up for grabs. Leverage SPARC tools and data in innovative ways. bit.ly/436EHlt #data #openscience #coding
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A SPARC-funded team of researchers and engineers has created a groundbreaking modular implantable device. In the spirit of #openscience, they're making the work open source. Learn more about this exciting news on the SPARC Portal: bit.ly/3xq26Tt #medtech #neuromodulation
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Level up your research game this summer with the Kids First CFDE Pediatric PowerUp! In just 2 hours a day over 5 days, you'll master the Kids First Data Portal, unlock the power of CAVATICA, and become a champion analyst. Sign up here: buff.ly/4cnD1az #KidsFirstDRC
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Congratulations to the Acute to Chronic @a2cps_pain program for winning a Golden Neuron Award for ensuring the voices of people with #LivedExperience were incorporated into the study! Read more about this amazing accomplishment below! go.nih.gov/39fMFiT
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Join us for the 2nd installment of our new webinar series featuring resources & tools within the #NIH_CFDE @CFDEKC @AviMaayan @CfdeWorkbench @LINCSProgram
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On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO rummageo.com register: cfde.info
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Unlocking the mysteries of childhood diseases by studying #ChildhoodCancer and #CongenitalDisorders together, #KidsFirstDRC and #KidsFirst researchers find common threads in the body's code. Together, we can fight for healthier futures.
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Join #KidsFirst and @kidsfirstDRC on May 29 from 11 AM-12PM ET for a transformative look into #pediatric research at the Spring Webinar, “Big Data Dialogue, The Next Catalyst for Cures.” Live demos & insightful discussions await. Register: nih.zoomgov.com/meeting/regist… #TogetherWeRise
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