Sourced from the CFDE-CC Documentation Wiki
Association between a collection and a NCBI Taxonomy ID
For collections with taxonomy metadata, this table will have one row for each taxon ID associated with each such collection.
All fields are required: this table can be empty (header-row only), but any non-header rows must leave no fields blank.
Some examples:
Field | Field Description | Required? | Field Value Type | Extra Info |
---|---|---|---|---|
collection_id_namespace | Identifier namespace for this collection [part 1 of 3-component composite primary key] | Required | string | This will be the value of id_namespace in the row in collection.tsv corresponding to the collection referenced in this row. If your program has not registered multiple CFDE identifier namespaces, this will be exactly the same value for all rows. |
collection_local_id | The ID of this collection [part 2 of 3-component composite primary key] | Required | string | This will be the value of local_id in the row in collection.tsv corresponding to the collection referenced in this row. |
taxon | An NCBI Taxonomy Database ID identifying this taxon [part 3 of 3-component composite primary key] | Required | string | Example: NCBI:txid9606 |