Sourced from the CFDE-CC Documentation Wiki
The subject_role_taxonomy.tsv
table is used to attach taxonomic labels to subjects.
Usage notes:
Field | Field Description | Required? | Field Value Type | Extra Info |
---|---|---|---|---|
subject_id_namespace | Identifier namespace for this subject | Required | string | This will be the value of id_namespace in the row in subject.tsv corresponding to the subject referenced in this row. If your program has not registered multiple CFDE identifier namespaces, this will be exactly the same value for all rows. |
subject_local_id | The ID of this subject | Required | string | This will be the value of local_id in the row in subject.tsv corresponding to the subject referenced in this row. |
role_id | A CFDE CV term categorizing the role assigned to this organism-level constituent component of this subject | Required | enum of strings | Table of allowed values |
taxonomy_id | An NCBI Taxonomy Database ID | Required | string | NCBI Taxonomy Browser --- Note formatting: be sure to prefix numeric taxon IDs with "NCBI:txid " --- Example (for "9606"): NCBI:txid9606 |