The 4D Nucleome consortium aims to understand the underlying principes of nuclear organization across space and time. Dr. Peter Park went over the infrastructure that 4DN have developed, the data they generated, as well as their published work over the course of ten years.

The workshop thoroughly discussed the Common Fund Data Ecosystem (CFDE), an open-access resource enabling the broad use of NIH Common Fund Data. We cover navigating and using CFDE data, analysis tools, and knowledge and how CFDE can accelerate common and rare human disease research and basic biological discoveries.

In this lecture, Giacomo Marino, a Bioinformatics Software Engineer in the Ma'ayan Lab at the Icahn School of Medicine at Mount Sinai, describes a new platform for assembling, augmenting, combining, visualizing, and analyzing gene sets. The platform utilizes LLMs to form hypotheses from datasets produced by NIH Common Fund programs.

In this lecture, Dr. Bernard de Bono presented information on the CFDE Communication and Outreach to Maximize Product Adoption (COMPA) partnership. He explained COMPAu2019s strategic approaches for user profiling, outreach activities, and gap analysis aimed to promote CFDE-developed products.

In this lecture, Dr Stephen Larson, the CEO of Metacell presented strategies for driving user engagement to scientific tools. Metacell works with the COMPA CFDE partnership. He explained the challenges of user adoption, and effective user engagement strategies, and shared their experiences on various methods of outreach activities. He also shared the survey about user behaviors and tendencies toward scientific products.

Dr. Martin Linquist, the PI of the Data Integration and Resource Center for Acute to Chronic Pain Signatures (A2CPS), presented an overview of the Acute to Chronic Pain Signatures consortium.

Ari Kahn, a PI for the A2CPS DCC, and a member of DIRC, TACC, covered how A2CPS manages and processes the data and the release plan.

Seth Berke, a Post-Bacc researcher explains a use case leveraging cloud infrastructure including Docker containers and CAVATICA to analyze data across various DCCs.

A Tour of the Human Reference Atlas (HRA) v2.1 was delivered by Katy Bu00f6rner, Center Director for the Cyberinfrastructure for Network Science Center (CNS), and Bruce Herr, Technical Director for CNS. They explain the history and goals of HuBMAP and the concept of the Vascular Common Coordinate Framework (VCCF).

Anna Waller, PhD introduced the importance and impact of the IDG program. She explains the collaborative efforts within the IDG consortium. She then covered the research output, global collaborations, and outreach initiatives that have advanced the understanding of understudied proteins and their potential for clinical therapeutics.