Extracellular RNA Communication (ExRNA)
The Extracellular RNA Communication program is exploring the biology of extracellular RNA (exRNA). Once thought to exist only within cells, in a paradigm shift for science, RNA is now known to be exported from cells as “extracellular RNA” and to play a role in cell-to-cell communication. Since its founding, the program has established data standards, a data portal, and tools and reagents available to the scientific community. The program cataloged exRNA molecules found in human biofluids like plasma, saliva, and urine from over 2000 donors. It also identified potential exRNA biomarkers for nearly 30 diseases, including cardiovascular disease, pregnancy complications, glaucoma, diabetes, and multiple types of cancer. (Retrieved from the NIH Common Fund site)
TRAINING & OUTREACH
CFDE Webinar Series
The CFDE Webinar Series will feature the exRNA DCC. The seminar will be about ‘Tools and methods for discovering disease-causing gene regulatory variants from WGS data with application to Congenital Heart Disease’ presented by Keyang Yu, a Genboree Research Assistant.
Starts: September 27, 2024
Biomarker discovery from extracellular (cell-free) RNA-seq and tissue of origin from GTEx RNA-seq profiles
Join us for an engaging hands-on workshop where Meenu Srinivasan of the Louise Laurent Lab at the University of California-San Diego will demonstrate how to perform integrative data analysis utilizing data from two Common Fund Data Ecosystem (CFDE) Data Coordinating Center portals followed by an interactive Q&A session.
Starts: September 12, 2024
Metadata and Processed Data Files
C2M2
2 Current File(s) | 6 Archived File(s)
2 Current File(s)
6 Archived File(s)
Modified 12/18/2024
Current
Filename:
CFDE_20241216_2.zipCreator: ExRNA
Filesize: 12.0 Mb
Date Modified: 12/18/2024
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 11.1 Mb
Date Modified: 8/17/2023
DCC Approved:
DRC Approved:
Archived
Filename:
datapackage.zipCreator: ExRNA
Filesize: 10.7 Mb
Date Modified: 3/23/2023
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 53.3 Mb
Date Modified: 4/16/2022
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 7.0 Mb
Date Modified: 1/21/2022
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 5.6 Mb
Date Modified: 8/19/2021
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 5.4 Mb
Date Modified: 6/11/2021
DCC Approved:
DRC Approved:
Filename:
datapackage.zipCreator: ExRNA
Filesize: 5.4 Mb
Date Modified: 3/18/2021
DCC Approved:
DRC Approved:
XMT
1 Current File(s) | 1 Archived File(s)
1 Current File(s)
1 Archived File(s)
Modified 9/25/2024
Current
Filename:
RBP_unique_loci_in_biofluids.rbpmtCreator: ExRNA
Filesize: 399.1 Kb
Date Modified: 9/25/2024
DCC Approved:
DRC Approved:
Archived
Filename:
RBP_unique_loci_in_biofluids.rbpmtCreator: ExRNA
Filesize: 398.7 Kb
Date Modified: 9/24/2024
DCC Approved:
DRC Approved:
Attribute Tables
0 Available Files
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Knowledge Graph Assertions
1 Current File(s) | 1 Archived File(s)
1 Current File(s)
1 Archived File(s)
Modified 5/8/2024
Current
Archived
Filename:
ERCC.edges.csvCreator: DRC
Filesize: 4.6 Gb
Date Modified: 10/26/2023
DCC Approved:
DRC Approved:
Interoperability Assets
ETL Scripts
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API Specifications
4 Current File(s) | 0 Archived File(s)
4 Current File(s)
0 Archived File(s)
Modified 8/30/2022
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PWB Metanodes
8 Current File(s) | 0 Archived File(s)
8 Current File(s)
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Modified 10/19/2023
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Chatbot Specifications
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Apps URLs
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